RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 C5orf51A6NDU8 294 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 H3BP45 60 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 K7EPK0 472 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 TSC22D2O75157 780 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 CRYBB3P26998 211 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 DCTN2Q13561 401 aaKnown RBP7.23□□□□□ -1.25
SRP54-210ENST00000556380 FAM90A2PQ658T7 463 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 THAP8Q8NA92 274 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 PSENENQ9NZ42 101 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 SMAD5-AS1Q9Y6J3 95 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 IGHV3-49A0A0A0MS15 119 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 FAM25EA8MYX2 175 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 TSPAN4O14817 238 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 CCNKO75909 580 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 SCGB1D2O95969 90 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 TOMM40O96008 361 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 CD7P09564 240 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 RD3LP0DJH9 198 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 PSG1P11464 419 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 ARL16Q0P5N6 197 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 GSG1LQ6UXU4 331 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 Q8WTZ3 238 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 ST8SIA2Q92186 375 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 SLC35E1Q96K37 410 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 RNF2Q99496 336 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 GINS3Q9BRX5 216 aa7.22□□□□□ -1.25
SRP54-210ENST00000556380 PAIP2BQ9ULR5 123 aaKnown RBP7.22□□□□□ -1.25
SRP54-210ENST00000556380 DNAH7Q8WXX0 4024 aa7.21□□□□□ -1.25
SRP54-210ENST00000556380 IGHV3OR16-13A0A075B7E8 117 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 IGHV3-74A0A0B4J1X5 117 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 SIX6O95475 246 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 METTL15P1P0C7V9 234 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 IGHV4-30-4P0DP06 118 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 NPPCP23582 126 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 ZNF90Q03938 601 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 USF2Q15853 346 aaPredicted RBP7.21□□□□□ -1.26
SRP54-210ENST00000556380 GUCA2BQ16661 112 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 LINC00322Q6ZN03 302 aaPredicted RBP7.21□□□□□ -1.26
SRP54-210ENST00000556380 ACOT7LQ6ZUV0 252 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 TRGV9Q99603 122 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 NEURL2Q9BR09 285 aa7.21□□□□□ -1.26
SRP54-210ENST00000556380 FNDC10F2Z333 226 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 DEDDO75618 318 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 FRMD6-AS1P0C7T7 363 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 H2BFSP57053 126 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 CD81P60033 236 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 RAB32Q13637 225 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 ZNF124Q15973 351 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 LAMTOR1Q6IAA8 161 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 OR8G2PQ6IF36 304 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 TMEM182Q6ZP80 229 aaPredicted RBP7.2□□□□□ -1.26
SRP54-210ENST00000556380 RBPMS2Q6ZRY4 209 aaKnown RBP7.2□□□□□ -1.26
SRP54-210ENST00000556380 TMEM144Q7Z5S9 345 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 STPG3Q8N7X2 389 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 METTL26Q96S19 204 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 SPAG8Q99932 426 aaPredicted RBP7.2□□□□□ -1.26
SRP54-210ENST00000556380 NMES1Q9C002 83 aa7.2□□□□□ -1.26
SRP54-210ENST00000556380 LSM5Q9Y4Y9 91 aaKnown RBP7.2□□□□□ -1.26
SRP54-210ENST00000556380 IGHV3-66A0A0C4DH42 116 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 ZFP92A6NM28 416 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 H0YIZ8 118 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 GOSR2O14653 212 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 DFFBO76075 338 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 IL4P05112 153 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 CD5P06127 495 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 PVALBP20472 110 aaPredicted RBP7.19□□□□□ -1.26
SRP54-210ENST00000556380 BMI1P35226 326 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 DLK1P80370 383 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 CYCSP99999 105 aaKnown RBP7.19□□□□□ -1.26
SRP54-210ENST00000556380 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 TCF24Q7RTU0 167 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 GTSCR1Q86UQ5 136 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 SBSPONQ8IVN8 264 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 DEFB125Q8N687 156 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 OR51G1Q8NGK1 321 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 RNF125Q96EQ8 232 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 GGACTQ9BVM4 153 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 WFDC10AQ9H1F0 79 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 ALG5Q9Y673 324 aa7.19□□□□□ -1.26
SRP54-210ENST00000556380 A0A1W2PS18 150 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 FAM24AA6NFZ4 105 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 OR11H12B2RN74 326 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 L7N2F9 121 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 BUB3O43684 328 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 SSNA1O43805 119 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 FABP1P07148 127 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 HNRNPCP07910 306 aaKnown RBP eCLIP7.18□□□□□ -1.268e-8■■■■□ 23.5
SRP54-210ENST00000556380 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 NHLRC4P0CG21 123 aaPredicted RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 P2RY1P47900 373 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 RRAS2P62070 204 aaPredicted RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 VAMP2P63027 116 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 OR2F1Q13607 317 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 RGS21Q2M5E4 152 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 ODF3L2Q3SX64 289 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 C16orf54Q6UWD8 224 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms