RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 TRIM4Q9C037 500 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 CKLFQ9UBR5 152 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 PKIGQ9Y2B9 76 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 AMMECR1Q9Y4X0 333 aaPredicted RBP1.54□□□□□ -2.16
CDKN3-210ENST00000556305 NUP155O75694 1391 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 CFTRP13569 1480 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 LRRC37A3O60309 1634 aa1.54□□□□□ -2.16
CDKN3-210ENST00000556305 POLR1AO95602 1720 aaPredicted RBP1.54□□□□□ -2.16
CDKN3-210ENST00000556305 A0A0D9SG52 128 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 DPRXA6NFQ7 191 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 OR4C46A6NHA9 309 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 PIRO00625 290 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 ADGRB2O60241 1585 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 UBBP0CG47 229 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 ARL14EPLP0DKL9 152 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 DMDP11532 3685 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 IL9P15248 144 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 MYL6P60660 151 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 SUPT4H1P63272 117 aaKnown RBP1.53□□□□□ -2.16
CDKN3-210ENST00000556305 EDDM3AQ14507 147 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 GREB1Q4ZG55 1949 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 AKIRIN2Q53H80 203 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 SUPT6HQ7KZ85 1726 aaKnown RBP1.53□□□□□ -2.16
CDKN3-210ENST00000556305 CPAMD8Q8IZJ3 1885 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 OR6V1Q8N148 313 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 CCDC90BQ9GZT6 254 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 UCK1Q9HA47 277 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 SLC39A9Q9NUM3 307 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 MED9Q9NWA0 146 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 MRPL27Q9P0M9 148 aaKnown RBP1.53□□□□□ -2.16
CDKN3-210ENST00000556305 NRXN3Q9Y4C0 1643 aa1.53□□□□□ -2.16
CDKN3-210ENST00000556305 SOX21Q9Y651 276 aaPredicted RBP1.53□□□□□ -2.16
CDKN3-210ENST00000556305 RALGAPA2Q2PPJ7 1873 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 KCPQ6ZWJ8 1503 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 LRBAP50851 2863 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 EXOC1LA0A1B0GW35 172 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 IBA57-AS1B1ANH7 110 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 TRAPPC2LH3BP13 241 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 FAAHO00519 579 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 HTR1AP08908 422 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 RBP1P09455 135 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 ZNF345Q14585 488 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 DEFB128Q7Z7B8 93 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 BPIFA4PQ86YQ2 179 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 KRT222Q8N1A0 295 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 DNAJC9Q8WXX5 260 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 C20orf27Q9GZN8 174 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 SLC22A13Q9Y226 551 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 HERC2O95714 4834 aa1.52□□□□□ -2.17
CDKN3-210ENST00000556305 MGAM2Q2M2H8 2515 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 COL4A1P02462 1669 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 COL4A6Q14031 1691 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 CUL7Q14999 1698 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 RTTNQ86VV8 2226 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 SORL1Q92673 2214 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 ATP10BO94823 1461 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 PRRC2CQ9Y520 2896 aaKnown RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 IGKV2-40A0A087WW87 121 aaPredicted RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 IGKV3D-7A0A0C4DH55 119 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 OR5F1O95221 314 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 IGKV2D-40P01614 121 aaPredicted RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 ANGP03950 147 aaKnown RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 HIST1H3AP68431 136 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 H3F3AP84243 136 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 SRSF6Q13247 344 aaKnown RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 Q6ZSA8 131 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 MIR17HGQ75NE6 70 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 ZNF439Q8NDP4 499 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 TSPAN32Q96QS1 320 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 SERPINI1Q99574 410 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 TMEM147Q9BVK8 224 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 C11orf68Q9H3H3 251 aaKnown RBP1.51□□□□□ -2.17
CDKN3-210ENST00000556305 LHFPL6Q9Y693 200 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 KIF13BQ9NQT8 1826 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 ABCA13Q86UQ4 5058 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 MALRD1Q5VYJ5 2156 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 MYO3AQ8NEV4 1616 aa1.51□□□□□ -2.17
CDKN3-210ENST00000556305 WRNQ14191 1432 aaPredicted RBP eCLIP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 FMN1Q68DA7 1419 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 MXRA5Q9NR99 2828 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 MTUS2Q5JR59 1369 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 ITPR2Q14571 2701 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 NSD1Q96L73 2696 aaPredicted RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 MARF1Q9Y4F3 1742 aaKnown RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 MRPS14O60783 128 aaKnown RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 TCL1BO95988 128 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 IGKV1-5P01602 117 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 S100A4P26447 101 aaKnown RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 IAH1Q2TAA2 248 aaPredicted RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 LCN15Q6UWW0 184 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 TRAPPC6BQ86SZ2 158 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 OR4D11Q8NGI4 311 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 CT55Q8WUE5 264 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 H1FXQ92522 213 aaKnown RBP1.5□□□□□ -2.17
CDKN3-210ENST00000556305 BTF3L4Q96K17 158 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 OR5AC2Q9NZP5 309 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 TENM3Q9P273 2699 aa1.5□□□□□ -2.17
CDKN3-210ENST00000556305 SPENQ96T58 3664 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 806.4 ms