RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PDE6DO43924 150 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 NDUFA3O95167 84 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 IGLV2-23P01705 113 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 SAA1P0DJI8 122 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 APELAP0DMC3 54 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 NPY1RP25929 384 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 RPS10P46783 165 aaKnown RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 COMPP49747 757 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 TNP2Q05952 138 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 RAB31Q13636 194 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 VMA21Q3ZAQ7 101 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 TMEM177Q53S58 311 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 KHDC1LQ5JSQ8 128 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 Q8N2B8 174 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 SLC24A4Q8NFF2 622 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 OSR1Q8TAX0 266 aaPredicted RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 Q8WTZ3 238 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 WFDC12Q8WWY7 111 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 FAM103A1Q9BTL3 118 aaKnown RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 BET1LQ9NYM9 111 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 LSM4Q9Y4Z0 139 aaKnown RBP7.75□□□□□ -1.17
PSEN1-213ENST00000555386 TRBV24-1A0A075B6N3 115 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 IGHV7-81A0A0B4J1V7 117 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 A0A1W2PPV4 95 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 A0A1W2PRX2 142 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 PSMB11A5LHX3 300 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 F6UZH7 168 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 G3V318 75 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 UPK2O00526 184 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 ATP6V0E1O15342 81 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 IGHG2P01859 326 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 CD28P10747 220 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 LGALS7P47929 136 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 MEOX2P50222 304 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 NDPQ00604 133 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 PRCDQ00LT1 54 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 ECSCRQ19T08 205 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 TEPPQ6URK8 271 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 OR5AU1Q8NGC0 362 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 OR5B3Q8NH48 314 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 TMEM170AQ8WVE7 144 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 RNF5Q99942 180 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 GGTLC1Q9BX51 225 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
PSEN1-213ENST00000555386 INS-IGF2F8WCM5 200 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 EIF3GO75821 320 aaKnown RBP eCLIP7.74□□□□□ -1.17
PSEN1-213ENST00000555386 CXorf1O96002 111 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 HLA-DRB1P01911 266 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 STAG3L2P0CL84 134 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 STAG3L3P0CL85 134 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 RPL29P47914 159 aaKnown RBP7.74□□□□□ -1.17
PSEN1-213ENST00000555386 CX3CL1P78423 397 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 S100A12P80511 92 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 TNXAQ16473 311 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 BSXQ3C1V8 233 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 NSUN5P1Q3KNT7 163 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 LCNL1Q6ZST4 164 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 PPP1R27Q86WC6 154 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 OR4A5Q8NH83 315 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 SPATA3Q8NHX4 192 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 ANAPC16Q96DE5 110 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 OR4F4Q96R69 305 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 C12orf57Q99622 126 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 MGST2Q99735 147 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF747Q9BV97 191 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 PARLQ9H300 379 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 TMPRSS5Q9H3S3 457 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 PXMP4Q9Y6I8 212 aa7.74□□□□□ -1.17
PSEN1-213ENST00000555386 C11orf94C9JXX5 98 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 PAGE4O60829 102 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 ACTL6BO94805 426 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 YIF1AO95070 293 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 PF4P02776 101 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 S100A9P06702 114 aaKnown RBP7.73□□□□□ -1.17
PSEN1-213ENST00000555386 CXCL1P09341 107 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 MYOD1P15172 320 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 RPL23P62829 140 aaKnown RBP7.73□□□□□ -1.17
PSEN1-213ENST00000555386 FABP9Q0Z7S8 132 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 KIAA0141Q14154 515 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-213ENST00000555386 FXYD3Q14802 87 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF674Q2M3X9 581 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 C2orf83Q53S99 150 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF343Q6P1L6 599 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 OR1L8Q8NGR8 309 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 VSTM2AQ8TAG5 236 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 FAM210BQ96KR6 192 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 ZNF430Q9H8G1 570 aaPredicted RBP7.73□□□□□ -1.17
PSEN1-213ENST00000555386 DOK5Q9P104 306 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 ARL2-SNX15V9GYD0 113 aa7.73□□□□□ -1.17
PSEN1-213ENST00000555386 TGIF2-C20orf24A0A0A6YYL0 155 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 TRAV41A0A0B4J266 112 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 TCRBV4S1A1TA0A5B7 111 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 HMGB3O15347 200 aaKnown RBP7.72□□□□□ -1.17
PSEN1-213ENST00000555386 MT-CO2P00403 227 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 CRYGBP07316 175 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 S100PP25815 95 aa7.72□□□□□ -1.17
PSEN1-213ENST00000555386 B2MP61769 119 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms