RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
SHMT2-214ENST00000554604 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 SEC14L6B5MCN3 397 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 CYB5BO43169 146 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 RNASE2P10153 161 aaKnown RBP9.65□□□□□ -0.86
SHMT2-214ENST00000554604 BCL2P10415 239 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 PPIFP30405 207 aaKnown RBP9.65□□□□□ -0.86
SHMT2-214ENST00000554604 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
SHMT2-214ENST00000554604 PSG5Q15238 335 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 HAGHQ16775 308 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-214ENST00000554604 UBE2E2Q96LR5 201 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 KLK15Q9H2R5 256 aa9.65□□□□□ -0.86
SHMT2-214ENST00000554604 ZMAT5Q9UDW3 170 aaKnown RBP9.65□□□□□ -0.86
SHMT2-214ENST00000554604 SMCO3A2RU48 225 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 FCN1O00602 326 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 SLC25A17O43808 307 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 CRYGBP07316 175 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 MAS1LP35410 378 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 RAB9AP51151 201 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 ERHP84090 104 aaKnown RBP9.64□□□□□ -0.87
SHMT2-214ENST00000554604 NDPQ00604 133 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 DEFB121Q5J5C9 76 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 OR5B12Q96R08 314 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 MGST2Q99735 147 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 GGTLC1Q9BX51 225 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-214ENST00000554604 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
SHMT2-214ENST00000554604 CNIH1O95406 144 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 OR13C7P0DN81 318 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-214ENST00000554604 EGFEM1PQ0D2K5 195 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 RAB31Q13636 194 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 MRGPRG-AS1Q2M3A8 158 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 ZNF562Q6V9R5 426 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 MMD2Q8IY49 270 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 MYOZ3Q8TDC0 251 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 RAB24Q969Q5 203 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 GNB4Q9HAV0 340 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 MANBALQ9NQG1 85 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
SHMT2-214ENST00000554604 DNAH3Q8TD57 4116 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 WI2-2373I1.2A0A1W2PRP0 233 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 CGB1A6NKQ9 187 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 K7EIL1 84 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 TSPAN4O14817 238 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 YIF1AO95070 293 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 GPX4P36969 197 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 CRIP2P52943 208 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 FGF8P55075 233 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 GNB1P62873 340 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 CD69Q07108 199 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 RHEBQ15382 184 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 C9orf66Q5T8R8 295 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 OR1N2Q8NGR9 330 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 CACNG8Q8WXS5 425 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 FAM103A1Q9BTL3 118 aaKnown RBP9.62□□□□□ -0.87
SHMT2-214ENST00000554604 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
SHMT2-214ENST00000554604 ZFP92A6NM28 416 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 NUPL2O15504 423 aaKnown RBP9.61□□□□□ -0.87
SHMT2-214ENST00000554604 EGR2P11161 476 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-214ENST00000554604 PSMB3P49720 205 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 FHL3Q13643 280 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 KIAA0141Q14154 515 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-214ENST00000554604 FXYD3Q14802 87 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 PRSS8Q16651 343 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 OR10W1Q8NGF6 305 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 TPSG1Q9NRR2 321 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 ZNF355PQ9NSJ1 428 aa9.61□□□□□ -0.87
SHMT2-214ENST00000554604 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 E7EUB6 86 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 TPPP2P59282 170 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 PRR20EP86478 221 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 PRR20CP86479 221 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 PRR20DP86480 221 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 PRR20BP86481 221 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 PRR20AP86496 221 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
SHMT2-214ENST00000554604 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms