RNA–Protein interactions for RNA: ENST00000554319.1

AL139354.1-201, humanhuman

TSL 5 BASIC

Gene AL139354.1, Length 645 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139354.1-201ENST00000554319 CDH23Q9H251 3354 aa4.41□□□□□ -1.7
AL139354.1-201ENST00000554319 SHANK1Q9Y566 2161 aa4.4□□□□□ -1.7
AL139354.1-201ENST00000554319 RANBP2P49792 3224 aaKnown RBP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 IGKV1D-17A0A075B6S4 117 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TRAV9-1A0A075B6T8 112 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 DEFB108AA8MXU0 73 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 SHISA9B4DS77 424 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 GYPAP02724 150 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 FABP1P07148 127 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 CD55P08174 381 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 FBP1P09467 338 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 MDKP21741 143 aaPredicted RBP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 VDAC2P45880 294 aaPredicted RBP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 SUB1P53999 127 aaKnown RBP eCLIP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TAS2R45P59539 299 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 B2MP61769 119 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 RPL23P62829 140 aaKnown RBP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 LCN2P80188 198 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TFF3Q07654 80 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TEX36Q5VZQ5 186 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 STUMQ69YW2 141 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 FAM71F2Q6NXP2 309 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 ZNF343Q6P1L6 599 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TPRX1Q8N7U7 411 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 OR4A5Q8NH83 315 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 RPUSD4Q96CM3 377 aaKnown RBP4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 SLC35E1Q96K37 410 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 IFI27L2Q9H2X8 130 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 GNB4Q9HAV0 340 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 TMEM167BQ9NRX6 74 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 DOK5Q9P104 306 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 LINC00312Q9Y6C7 94 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 PXMP4Q9Y6I8 212 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 URGCP-MRPS24S4R325 110 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 XIRP2A4UGR9 3374 aa4.4□□□□□ -1.71
AL139354.1-201ENST00000554319 FREM1Q5H8C1 2179 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 IGHV3OR15-7A0A075B7D8 119 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 TGIF2-C20orf24A0A0A6YYL0 155 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 IGHV1-46P01743 117 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 TRGC2P03986 189 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 CXCL1P09341 107 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 STAG3L2P0CL84 134 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 STAG3L3P0CL85 134 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 CGB3P0DN86 165 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 CGB7P0DN87 165 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 RPL29P47914 159 aaKnown RBP4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 ERHP84090 104 aaKnown RBP4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 SRSF6Q13247 344 aaKnown RBP4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 COX19Q49B96 90 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 LEMD1Q68G75 181 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 SSX9Q7RTT3 188 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 LRP11Q86VZ4 500 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 OR2T10Q8NGZ9 312 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 OR5B3Q8NH48 314 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 RASL10AQ92737 203 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 GAFA1Q96PS6 74 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 PYGO2Q9BRQ0 406 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 GGTLC1Q9BX51 225 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 LINC00574Q9H8X3 128 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 BET1LQ9NYM9 111 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 RPUSD1Q9UJJ7 312 aaKnown RBP4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 FAM215AQ9Y5M1 114 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 OR51B2Q9Y5P1 312 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 LY96Q9Y6Y9 160 aa4.39□□□□□ -1.71
AL139354.1-201ENST00000554319 LAMA3Q16787 3333 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 PPIAL4EA0A075B759 164 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 UPK2O00526 184 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 NDUFB3O43676 98 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BKO60814 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 GGCTO75223 188 aaKnown RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 IGKV1D-33P01593 117 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 IGKV1-33P01594 117 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 TYMSP04818 313 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BJP06899 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 PFN1P07737 140 aaKnown RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 TRGC1P0CF51 173 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 SAA2P0DJI9 122 aaPredicted RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 PPIAL4FP0DN26 164 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 USF1P22415 310 aaPredicted RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BOP23527 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BBP33778 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 GPX4P36969 197 aaPredicted RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BDP58876 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST1H2BCP62807 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 PRCDQ00LT1 54 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST2H2BEQ16778 126 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 C2orf83Q53S99 150 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 RPL39P5Q59GN2 51 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 SPINK9Q5DT21 86 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 CT45A1Q5HYN5 189 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 NCMAPQ5T1S8 102 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 REG3GQ6UW15 175 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 SPNS3Q6ZMD2 512 aa4.38□□□□□ -1.71
AL139354.1-201ENST00000554319 SLC25A48Q6ZT89 311 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms