RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SPINK9Q5DT21 86 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF709Q8N972 641 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 ZNRF2Q8NHG8 242 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 NIPSNAP3BQ9BS92 247 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 ZNF2Q9BSG1 426 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-219ENST00000553488 YTHDF1Q9BYJ9 559 aaKnown RBP5.11□□□□□ -1.59
ATXN3-219ENST00000553488 RNF167Q9H6Y7 350 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 RFNGQ9Y644 331 aa5.11□□□□□ -1.59
ATXN3-219ENST00000553488 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 P0C879 139 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 HTN3P15516 51 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 CBX5P45973 191 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 RFX2P48378 723 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 DEFB1P60022 68 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 NUTF2P61970 127 aaKnown RBP5.1□□□□□ -1.59
ATXN3-219ENST00000553488 ERHP84090 104 aaKnown RBP5.1□□□□□ -1.59
ATXN3-219ENST00000553488 BAK1Q16611 211 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 IZUMO4Q1ZYL8 232 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 BSXQ3C1V8 233 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 GDF5OSQ5U4N7 250 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 SPATA12Q7Z6I5 190 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 CCDC28AQ8IWP9 274 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 CMTM1Q8IZ96 169 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 C15orf53Q8NAA6 179 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 TSPAN14Q8NG11 270 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 OR4X1Q8NH49 305 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 OR4A16Q8NH70 328 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 MRGPRFQ96AM1 343 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 VCXQ9H320 206 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 TNFRSF18Q9Y5U5 241 aa5.1□□□□□ -1.59
ATXN3-219ENST00000553488 CORTO00230 105 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 IGKV1-5P01602 117 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 HNRNPCP07910 306 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 IGLC1P0CG04 106 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 SDC2P34741 201 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 NKX2-1P43699 371 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 SNRPD3P62318 126 aaKnown RBP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 USF2Q15853 346 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 TIGITQ495A1 244 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 PHLDA2Q53GA4 152 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 H2BFWTQ7Z2G1 175 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 TBC1D26Q86UD7 250 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 NARS2Q96I59 477 aaKnown RBP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 NRN1Q9NPD7 142 aa5.09□□□□□ -1.59
ATXN3-219ENST00000553488 YTHDF2Q9Y5A9 579 aaKnown RBP5.09□□□□□ -1.59
ATXN3-219ENST00000553488 IGHV3OR16-12A0A075B7B8 117 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 A0A0B4J293 547 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 LOC102723971A0A1B0GUV8 181 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 F5H697 171 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 BUB3O43684 328 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 TRIAP1O43715 76 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 PMP2P02689 132 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 SNCAP37840 140 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 OPRK1P41145 380 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 RPL5P46777 297 aaKnown RBP5.08□□□□□ -1.6
ATXN3-219ENST00000553488 ALDH3B2P48448 385 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 EIF2B2P49770 351 aaKnown RBP5.08□□□□□ -1.6
ATXN3-219ENST00000553488 AP2S1P53680 142 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-219ENST00000553488 UCP3P55916 312 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 FXYD7P58549 80 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 TAS2R46P59540 309 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 SIGLEC15Q6ZMC9 328 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 C1orf158Q8N1D5 194 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 SLC35G3Q8N808 338 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 OR5H2Q8NGV7 314 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 TMEM230Q96A57 120 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 RNF125Q96EQ8 232 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 SLC35B3Q9H1N7 401 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 SAV1Q9H4B6 383 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-219ENST00000553488 IFT46Q9NQC8 304 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 TMED3Q9Y3Q3 217 aa5.08□□□□□ -1.6
ATXN3-219ENST00000553488 EPM2AB3EWF7 344 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 SOCS3O14543 225 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 HRH1P35367 487 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 YPEL3P61236 119 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-219ENST00000553488 DAD1P61803 113 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 MXD1Q05195 221 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 ZNF79Q15937 498 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 PRSS54Q6PEW0 395 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 FOXI2Q6ZQN5 318 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 OR1S2Q8NGQ3 325 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 DIABLOQ9NR28 239 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 LINC00588Q9Y4M8 146 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
ATXN3-219ENST00000553488 LRP1Q07954 4544 aaKnown RBP5.06□□□□□ -1.6
ATXN3-219ENST00000553488 TRAV30A0A087WSZ9 112 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 A0A0G2JRQ6 117 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 A8MTW9 85 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 EBAG9O00559 213 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 SCGB2A1O75556 95 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 NXPH3O95157 252 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 IGKV3-20P01619 116 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 HBE1P02100 147 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 IL4P05112 153 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 PSMB9P28065 219 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 HOXA1P49639 335 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-219ENST00000553488 RND2P52198 227 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 PAX9P55771 341 aa5.06□□□□□ -1.6
ATXN3-219ENST00000553488 TAS2R20P59543 309 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms