RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, human

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-206	ENST00000553447	ATP6V0B	Q99437	205 aa		13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	RNF2	Q99496	336 aa		13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	MRPL32	Q9BYC8	188 aa	Known RBP	13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	KLK15	Q9H2R5	256 aa		13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	SEPSECS	Q9HD40	501 aa	Known RBP	13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	DOK5	Q9P104	306 aa		13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	FUT9	Q9Y231	359 aa		13.66	□□□□□ -0.22
PSEN1-206	ENST00000553447	CTSG	P08311	255 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	STAG3L2	P0CL84	134 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	STAG3L3	P0CL85	134 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	PSMB8	P28062	276 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	GPR183	P32249	361 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	RAB9A	P51151	201 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	RPL15	P61313	204 aa	Known RBP	13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	C10orf113	Q5VZT2	155 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	CLEC19A	Q6UXS0	136 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	PATE2	Q6UY27	113 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447		Q6ZSV7	163 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	MIR17HG	Q75NE6	70 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	OR51G1	Q8NGK1	321 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	OR1B1	Q8NGR6	318 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	SERTAD4	Q9NUC0	356 aa		13.65	□□□□□ -0.22
PSEN1-206	ENST00000553447	MXRA5	Q9NR99	2828 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	NUPL2	O15504	423 aa	Known RBP	13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	HYPM	O75409	117 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	CLEC3B	P05452	202 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	ORM2	P19652	201 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	ADM	P35318	185 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	LYZ	P61626	148 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	UQCC3	Q6UW78	93 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	C10orf99	Q6UWK7	81 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447		Q8WTZ3	238 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	FAM210A	Q96ND0	272 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	JMJD8	Q96S16	334 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	CHRDL1	Q9BU40	450 aa		13.64	□□□□□ -0.23
PSEN1-206	ENST00000553447	BAHCC1	Q9P281	2608 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447		A0A0G2JLM5	398 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	TGOLN2	O43493	480 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	FOXE3	Q13461	319 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	TEX38	Q6PEX7	206 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	LCNL1	Q6ZST4	164 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	ZNF491	Q8N8L2	437 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	SCRT1	Q9BWW7	348 aa		13.63	□□□□□ -0.23
PSEN1-206	ENST00000553447	HIVEP2	P31629	2446 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	OR2C1	O95371	312 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	CXorf1	O96002	111 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	CRYBA1	P05813	215 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	ELANE	P08246	267 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	ARL14EPL	P0DKL9	152 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	SRSF3	P84103	164 aa	Known RBP	13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	GUK1	Q16774	197 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	ZNF600	Q6ZNG1	722 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	RNF125	Q96EQ8	232 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	UHRF2	Q96PU4	802 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	PBDC1	Q9BVG4	233 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	TECR	Q9NZ01	308 aa	Known RBP	13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	HIGD1A	Q9Y241	93 aa		13.62	□□□□□ -0.23
PSEN1-206	ENST00000553447	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	CYSRT1	A8MQ03	144 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	IL4	P05112	153 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	C8orf88	P0DMB2	117 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	TAS2R45	P59539	299 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	PMS2P11	Q13670	270 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	KHDC3L	Q587J8	217 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	TOR2A	Q5JU69	321 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	MORN5	Q5VZ52	161 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	ZNF343	Q6P1L6	599 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	LINC00305	Q7Z4B0	112 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	ZNF414	Q96IQ9	312 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	TMPRSS5	Q9H3S3	457 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	TMEM231	Q9H6L2	316 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	GNB4	Q9HAV0	340 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	MRPL27	Q9P0M9	148 aa	Known RBP	13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	GNG13	Q9P2W3	67 aa		13.61	□□□□□ -0.23
PSEN1-206	ENST00000553447	RBFOX3	A6NFN3	312 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	PPP5D1	E7EU14	171 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	IFNA1	P01562	189 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	IGHV3-11	P01762	117 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	CD5	P06127	495 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	PSMB3	P49720	205 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	KIAA0141	Q14154	515 aa	Predicted RBP	13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	HAGH	Q16775	308 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	IQCF2	Q8IXL9	164 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	RNF152	Q8N8N0	203 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	OR4X2	Q8NGF9	303 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	FAM167A-AS1	Q96KT0	104 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	SLC25A2	Q9BXI2	301 aa		13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	EIF5A2	Q9GZV4	153 aa	Known RBP	13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PSEN1-206	ENST00000553447	TRAV5	A0A0B4J249	113 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	LOC102723971	A0A1B0GUV8	181 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447		I3L521	148 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	CRLF1	O75462	422 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	RPLP1	P05386	114 aa	Known RBP	13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	S100A1	P23297	94 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	GCHFR	P30047	84 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	ARL3	P36405	182 aa		13.59	□□□□□ -0.23
PSEN1-206	ENST00000553447	REL	Q04864	619 aa	Predicted RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms