RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 IL15RAQ13261 267 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
CPSF2-202ENST00000553427 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 DEFB125Q8N687 156 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 ASCL2Q99929 193 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 IGKV1OR2-108A0A075B7D4 117 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 C7orf66A4D0T2 115 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 K7EPK0 472 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 NUP62P37198 522 aaPredicted RBP13.77□□□□□ -0.21
CPSF2-202ENST00000553427 OR8G2PQ6IF36 304 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 LILRB2Q8N423 598 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 RNF125Q96EQ8 232 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 GRAMD2BQ96HH9 432 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 TM2D3Q9BRN9 247 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 WFDC10AQ9H1F0 79 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 C11orf1Q9H5F2 150 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 SRD5A3Q9H8P0 318 aa13.77□□□□□ -0.21
CPSF2-202ENST00000553427 CFDP00746 253 aaPredicted RBP13.76□□□□□ -0.21
CPSF2-202ENST00000553427 P2RY1P47900 373 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 PAFAH1B2P68402 229 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 DLK1P80370 383 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 ZNF90Q03938 601 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 ODF3L2Q3SX64 289 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 TMEM144Q7Z5S9 345 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 RABAC1Q9UI14 185 aa13.76□□□□□ -0.21
CPSF2-202ENST00000553427 IGHV3-66A0A0C4DH42 116 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 DFFBO76075 338 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 PTTG1O95997 202 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 METTL15P1P0C7V9 234 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
CPSF2-202ENST00000553427 AKR1C1Q04828 323 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 OR10P1Q8NGE3 313 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 GGACTQ9BVM4 153 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 U3KQK5 164 aa13.75□□□□□ -0.21
CPSF2-202ENST00000553427 RBMY1BA6NDE4 496 aaKnown RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 RBMY1EA6NEQ0 496 aaKnown RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 L7N2F9 121 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 RBMY1DP0C7P1 496 aaKnown RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 EIF2B2P49770 351 aaKnown RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 VAMP2P63027 116 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 HAGHQ16775 308 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 C16orf54Q6UWD8 224 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 MS4A6AQ9H2W1 248 aa13.74□□□□□ -0.21
CPSF2-202ENST00000553427 LSM5Q9Y4Y9 91 aaKnown RBP13.74□□□□□ -0.21
CPSF2-202ENST00000553427 HELTA6NFD8 242 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 BUB3O43684 328 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 CCNKO75909 580 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 NMES1Q9C002 83 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 ZMAT4Q9H898 229 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 TENM3Q9P273 2699 aa13.73□□□□□ -0.21
CPSF2-202ENST00000553427 GOSR2O14653 212 aa13.72□□□□□ -0.21
CPSF2-202ENST00000553427 DEDDO75618 318 aa13.72□□□□□ -0.21
CPSF2-202ENST00000553427 RAB32Q13637 225 aa13.72□□□□□ -0.21
CPSF2-202ENST00000553427 LYRM2Q9NU23 88 aaPredicted RBP13.72□□□□□ -0.21
CPSF2-202ENST00000553427 MGAT4CQ9UBM8 478 aa13.72□□□□□ -0.21
CPSF2-202ENST00000553427 DNAH7Q8WXX0 4024 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 AP2S1P53680 142 aaPredicted RBP13.71□□□□□ -0.21
CPSF2-202ENST00000553427 S100A10P60903 97 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 LYZP61626 148 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 CYCSP99999 105 aaKnown RBP13.71□□□□□ -0.21
CPSF2-202ENST00000553427 OR2F1Q13607 317 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 C1orf194Q5T5A4 169 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 BPIFCQ8NFQ6 507 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 RCHY1Q96PM5 261 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 SPATA25Q9BR10 227 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 GGTLC1Q9BX51 225 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 NPVFQ9HCQ7 196 aa13.71□□□□□ -0.21
CPSF2-202ENST00000553427 IGKV3-7A0A075B6H7 116 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 SMCO3A2RU48 225 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 K7EQG2 157 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 DNASE2O00115 360 aaPredicted RBP13.7□□□□□ -0.22
CPSF2-202ENST00000553427 TFPI2P48307 235 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 CAV2P51636 162 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 SELENOTP62341 195 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 RPL11P62913 178 aaKnown RBP13.7□□□□□ -0.22
CPSF2-202ENST00000553427 ARL16Q0P5N6 197 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 CYP2G1PQ6ZSU1 146 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
CPSF2-202ENST00000553427 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
CPSF2-202ENST00000553427 LOC102724200A0A096LPH7 203 aaPredicted RBP13.69□□□□□ -0.22
CPSF2-202ENST00000553427 SSNA1O43805 119 aa13.69□□□□□ -0.22
CPSF2-202ENST00000553427 BCAP31P51572 246 aa13.69□□□□□ -0.22
CPSF2-202ENST00000553427 RRAS2P62070 204 aaPredicted RBP13.69□□□□□ -0.22
CPSF2-202ENST00000553427 DCANP1Q8TF63 244 aa13.69□□□□□ -0.22
CPSF2-202ENST00000553427 SEPSECSQ9HD40 501 aaKnown RBP13.69□□□□□ -0.22
CPSF2-202ENST00000553427 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
CPSF2-202ENST00000553427 SIX6O95475 246 aa13.68□□□□□ -0.22
CPSF2-202ENST00000553427 S100A7P31151 101 aa13.68□□□□□ -0.22
CPSF2-202ENST00000553427 SULT1A1P50225 295 aa13.68□□□□□ -0.22
CPSF2-202ENST00000553427 H2BFSP57053 126 aa13.68□□□□□ -0.22
CPSF2-202ENST00000553427 PLP1P60201 277 aa13.68□□□□□ -0.22
CPSF2-202ENST00000553427 SLC38A11Q08AI6 406 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms