RNA–Protein interactions for RNA: ENST00000553144.1

ATP2A2-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-212ENST00000553144 NTMQ9P121 344 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 MTFP1Q9UDX5 166 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNF629Q9UEG4 869 aaPredicted RBP3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 RPUSD1Q9UJJ7 312 aaKnown RBP3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 FAM215AQ9Y5M1 114 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 SELENOKQ9Y6D0 94 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 PXMP4Q9Y6I8 212 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 CPAMD8Q8IZJ3 1885 aa3.56□□□□□ -1.84
ATP2A2-212ENST00000553144 TRBV5-3A0A0A0MS03 114 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 IGHV3OR16-9A0A0B4J2B5 98 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 OR2T1O43869 369 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SS18L1O75177 396 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SPINK8P0C7L1 97 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 IGLC1P0CG04 106 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 HKR1P10072 659 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 CD1DP15813 335 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 BRWD1-AS2P59051 145 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 TAS2R46P59540 309 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 HERV-K104P61576 105 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 CATR1Q13166 79 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 IQCJQ1A5X6 159 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 KLF17Q5JT82 389 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 C10orf91Q5T1B1 145 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 CLEC19AQ6UXS0 136 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 IZUMO2Q6UXV1 221 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 C16orf47Q6ZP98 133 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 TRPT1Q86TN4 253 aaKnown RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNF429Q86V71 674 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 OR8D4Q8NGM9 314 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SLC25A40Q8TBP6 338 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 FRZBQ92765 325 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 TSLPQ969D9 159 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SLC25A21Q9BQT8 299 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 MRPL32Q9BYC8 188 aaKnown RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 POLR2J3Q9H1A7 115 aaKnown RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 HEXA-AS1Q9H8Q6 139 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 EXOSC3Q9NQT5 275 aaKnown RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 SMCO4Q9NRQ5 59 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNF443Q9Y2A4 671 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 AMMECR1Q9Y4X0 333 aaPredicted RBP3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 TLN2Q9Y4G6 2542 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 CUBNO60494 3623 aa3.55□□□□□ -1.84
ATP2A2-212ENST00000553144 ZANQ9Y493 2812 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 LINC00473A8K010 186 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 B4DEV8 164 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 FFAR1O14842 300 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 ATP6V0E1O15342 81 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 PAX4O43316 350 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 PPIBP23284 216 aaKnown RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 KRTAP1-1Q07627 177 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 DAZAP2Q15038 168 aaPredicted RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 FAM222AQ5U5X8 452 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 Q6Q795 121 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 Q6ZSV7 163 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 FOXL2NBQ6ZUU3 175 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 LRRTM1Q86UE6 522 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 RPS19BP1Q86WX3 136 aaKnown RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 ODF3L1Q8IXM7 274 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 HIST3H2BBQ8N257 126 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 RNF175Q8N4F7 328 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 ZFP62Q8NB50 900 aaPredicted RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 NEXN-AS1Q8NBZ9 246 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNRF1Q8ND25 227 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 OR5D14Q8NGL3 314 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 OR52P1PQ8NH57 321 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 LINC01560Q8TB33 94 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 LRRC29Q8WV35 223 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 RNF185Q96GF1 192 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 NMNAT3Q96T66 252 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 PAXXQ9BUH6 204 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 RTL8AQ9BWD3 113 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 WDR61Q9GZS3 305 aaKnown RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 BET1LQ9NYM9 111 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 C11orf21Q9P2W6 132 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 NUFIP1Q9UHK0 495 aaKnown RBP3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 SIGLEC7Q9Y286 467 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNF407Q9C0G0 2248 aa3.54□□□□□ -1.84
ATP2A2-212ENST00000553144 SCN2AQ99250 2005 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 IGLV9-49A0A0B4J1Y8 123 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 IZUMO1RA6ND01 250 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 PGPA6NDG6 321 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 ZNF860A6NHJ4 632 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 GABARAPH6UMI1 98 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 UPK2O00526 184 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 JTBO76095 146 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 IGHV3-9P01782 118 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 H2AFZP0C0S5 128 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 RBMXP38159 391 aaKnown RBP3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 PSMB2P49721 201 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 THBS3P49746 956 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 TMBIM6P55061 237 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 AQP4P55087 323 aa3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 NDUFV3P56181 108 aaKnown RBP3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 RPS11P62280 158 aaKnown RBP eCLIP3.53□□□□□ -1.84
ATP2A2-212ENST00000553144 VMA21Q3ZAQ7 101 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms