RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 LHFPL1Q86WI0 220 aa11.88□□□□□ -0.51
CACNB3-222ENST00000552465 SNX29P2Q8IUI4 249 aa11.88□□□□□ -0.51
CACNB3-222ENST00000552465 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
CACNB3-222ENST00000552465 RNASE11Q8TAA1 199 aaKnown RBP11.88□□□□□ -0.51
CACNB3-222ENST00000552465 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-222ENST00000552465 SMIM31A0A1B0GVY4 71 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 UCP1P25874 307 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 ALDH3B2P48448 385 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 PSMB3P49720 205 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 RORCP51449 518 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 NEDD8Q15843 81 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 FAM78BQ5VT40 261 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 SPATA12Q7Z6I5 190 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 SLC24A4Q8NFF2 622 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 TMEM170AQ8WVE7 144 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 ACY3Q96HD9 319 aa11.87□□□□□ -0.51
CACNB3-222ENST00000552465 SOCS3O14543 225 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 NUP62P37198 522 aaPredicted RBP11.86□□□□□ -0.51
CACNB3-222ENST00000552465 PAX9P55771 341 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 FAM219AQ8IW50 185 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 COQ8AQ8NI60 647 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 RNF125Q96EQ8 232 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 MAGT1Q9H0U3 335 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
CACNB3-222ENST00000552465 F6UB75 175 aa11.85□□□□□ -0.51
CACNB3-222ENST00000552465 EBLN2Q6P2I7 272 aa11.85□□□□□ -0.51
CACNB3-222ENST00000552465 PFDN2Q9UHV9 154 aa11.85□□□□□ -0.51
CACNB3-222ENST00000552465 A0A0J9YX75 114 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 CEBPZOSA8MTT3 80 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 B3GALNT1O75752 331 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 APOA1P02647 267 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 RNASE10Q5GAN6 216 aaKnown RBP11.84□□□□□ -0.51
CACNB3-222ENST00000552465 OR8G2PQ6IF36 304 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 CCDC71LQ8N9Z2 235 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 ZFAND1Q8TCF1 268 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 PBDC1Q9BVG4 233 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 COMMD3Q9UBI1 195 aa11.84□□□□□ -0.51
CACNB3-222ENST00000552465 LYRM9A8MSI8 78 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 CDS2O95674 445 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 NUDT3O95989 172 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 CCL18P55774 89 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 GPR146Q96CH1 333 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 IGF2BP2-AS1Q96M15 143 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 TMEM208Q9BTX3 173 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 CACNG5Q9UF02 275 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 LINC00588Q9Y4M8 146 aa11.83□□□□□ -0.52
CACNB3-222ENST00000552465 F5H768 121 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 ISLRO14498 428 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 CD3DP04234 171 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 PRM2P04554 102 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
CACNB3-222ENST00000552465 SUPT4H1P63272 117 aaKnown RBP11.82□□□□□ -0.52
CACNB3-222ENST00000552465 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 NOXA1Q86UR1 476 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 OR13C8Q8NGS7 320 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 TERB2Q8NHR7 220 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 LHFPL5Q8TAF8 219 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 Q9H521 79 aa11.82□□□□□ -0.52
CACNB3-222ENST00000552465 A8MTW9 85 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 ZNF705GA8MUZ8 300 aaPredicted RBP11.81□□□□□ -0.52
CACNB3-222ENST00000552465 OR5AC1P0C628 307 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 ELK1P19419 428 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 KRTAP10-2P60368 255 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 KLF9Q13886 244 aaPredicted RBP11.81□□□□□ -0.52
CACNB3-222ENST00000552465 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 SELENOHQ8IZQ5 122 aaKnown RBP11.81□□□□□ -0.52
CACNB3-222ENST00000552465 GLYATL2Q8WU03 294 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 ABHD1Q96SE0 405 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 RPRMQ9NS64 109 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 DOK5Q9P104 306 aa11.81□□□□□ -0.52
CACNB3-222ENST00000552465 APOBP04114 4563 aaKnown RBP11.81□□□□□ -0.52
CACNB3-222ENST00000552465 HERC1Q15751 4861 aa11.8□□□□□ -0.52
CACNB3-222ENST00000552465 ZNF90Q03938 601 aa11.8□□□□□ -0.52
CACNB3-222ENST00000552465 MEF2DQ14814 521 aa11.8□□□□□ -0.52
CACNB3-222ENST00000552465 RNASE12Q5GAN4 147 aaKnown RBP11.8□□□□□ -0.52
CACNB3-222ENST00000552465 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
CACNB3-222ENST00000552465 DNAH5Q8TE73 4624 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 IGKV1D-37A0A075B6S9 117 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 TEX13DA0A0J9YY54 714 aaPredicted RBP11.79□□□□□ -0.52
CACNB3-222ENST00000552465 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 TBPP20226 339 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 MARCH1Q8TCQ1 289 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 YIPF6Q96EC8 236 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 Q9H8V8 135 aa11.79□□□□□ -0.52
CACNB3-222ENST00000552465 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
CACNB3-222ENST00000552465 HPGDSO60760 199 aa11.78□□□□□ -0.52
CACNB3-222ENST00000552465 ATP5G1P05496 136 aa11.78□□□□□ -0.52
CACNB3-222ENST00000552465 TSPOP30536 169 aa11.78□□□□□ -0.52
CACNB3-222ENST00000552465 ATP5G3P48201 142 aa11.78□□□□□ -0.52
CACNB3-222ENST00000552465 LYZP61626 148 aa11.78□□□□□ -0.52
CACNB3-222ENST00000552465 FCN2Q15485 313 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms