RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 CFAP46Q8IYW2 2715 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 IGLV2-8P01709 118 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 FAM106CPP0CH98 169 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 MYCNOSP40205 109 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 LYZP61626 148 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 NDPQ00604 133 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 CCL19Q99731 98 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
RAB3IP-216ENST00000552199 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 SLC17A3O00476 420 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 GCGP01275 180 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 FABP1P07148 127 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 NBEAP1P0C6P0 100 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 GP9P14770 177 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 SAA4P35542 130 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 ACTL10Q5JWF8 245 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 FAM120AOSQ5T036 256 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 C1RLQ9NZP8 487 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 CDC42EP3Q9UKI2 254 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 MED13LQ71F56 2210 aa11.06□□□□□ -0.64
RAB3IP-216ENST00000552199 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 PEX7O00628 323 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 SMIM6P0DI80 62 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 BRS3P32247 399 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 CNN1P51911 297 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 Q8N9W7 124 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 BLNKQ8WV28 456 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 MRPL27Q9P0M9 148 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 V9GYV3 84 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 ABCA1O95477 2261 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 NPFFO15130 113 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 GFI1BQ5VTD9 330 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 LEMD1Q68G75 181 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 FAM168AQ92567 244 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 LINC00479Q96M42 142 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 OSTCQ9NRP0 149 aa11.05□□□□□ -0.64
RAB3IP-216ENST00000552199 PGPA6NDG6 321 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 TOMM40O96008 361 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 HIST3H2BBQ8N257 126 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 EPDR1Q9UM22 224 aa11.04□□□□□ -0.64
RAB3IP-216ENST00000552199 TRAV30A0A087WSZ9 112 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 ISLRO14498 428 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 RNF224P0DH78 156 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 MFAP4P55083 255 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 PAX8Q06710 450 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 ZNF48Q96MX3 618 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 IGHV4-61A0A0C4DH41 118 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 SLC25A5P05141 298 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 MGST1P10620 155 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 GNG5P63218 68 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 RPEL1Q2QD12 228 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 ZNF600Q6ZNG1 722 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 SPOCK3Q9BQ16 436 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 GAR1Q9NY12 217 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
RAB3IP-216ENST00000552199 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 WI2-2373I1.2A0A1W2PRP0 233 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 NDUFS8O00217 210 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 GNG7O60262 68 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 YPEL3P61236 119 aaPredicted RBP11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 ZNF491Q8N8L2 437 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 TMEM68Q96MH6 324 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 GPR61Q9BZJ8 451 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 THYN1Q9P016 225 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 S4R3C0 116 aa11.02□□□□□ -0.65
RAB3IP-216ENST00000552199 NDUFB8O95169 186 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 HIST1H1BP16401 226 aaKnown RBP11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 S100A2P29034 98 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 BAGE2Q86Y30 109 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
RAB3IP-216ENST00000552199 Q9H3A6 140 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms