RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 RNF182Q8N6D2 247 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 Q8N9W7 124 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 SNRNP25Q9BV90 132 aaKnown RBP4.25□□□□□ -1.73
VPS29-210ENST00000552130 MPC1Q9Y5U8 109 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 PZPP20742 1482 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 KDM6AO15550 1401 aaPredicted RBP4.24□□□□□ -1.73
VPS29-210ENST00000552130 CRB1P82279 1406 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 MYOM3Q5VTT5 1437 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 ATAD5Q96QE3 1844 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 FNDC10F2Z333 226 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 SOD1P00441 154 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 IGKV1D-33P01593 117 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 IGKV1-33P01594 117 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 TRGV3P03979 118 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 IGKV1-16P04430 117 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 SLC25A5P05141 298 aaKnown RBP4.24□□□□□ -1.73
VPS29-210ENST00000552130 ZNF286BP0CG31 522 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 FXYD7P58549 80 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
VPS29-210ENST00000552130 C10orf91Q5T1B1 145 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 SAXO1Q8IYX7 474 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 WFDC11Q8NEX6 87 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 LINC01560Q8TB33 94 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 RBPMSQ93062 196 aaKnown RBP4.24□□□□□ -1.73
VPS29-210ENST00000552130 PRELID3AQ96N28 172 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 HIST1H2BLQ99880 126 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 NPCDR1Q9BY65 106 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 TTTY13Q9BZ97 58 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 DUSP21Q9H596 190 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 SCP2D1Q9UJQ7 156 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 ZNF222Q9UK12 451 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 EPDR1Q9UM22 224 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 IER3IP1Q9Y5U9 82 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 NUP210LQ5VU65 1888 aa4.24□□□□□ -1.73
VPS29-210ENST00000552130 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 LRP4O75096 1905 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 CITO14578 2027 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 TRGV10A0A0A0MS01 117 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 C11orf94C9JXX5 98 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 UQCRQO14949 82 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 SLC25A20O43772 301 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 SH2D1AO60880 128 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 HLA-DRB4P13762 266 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 SLC25A16P16260 332 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 AQP4P55087 323 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 S100A10P60903 97 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 AKR1C1Q04828 323 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 IL17AQ16552 155 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 C16orf47Q6ZP98 133 aaPredicted RBP4.23□□□□□ -1.73
VPS29-210ENST00000552130 MIR17HGQ75NE6 70 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 LINC00311Q8N616 119 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 ELSPBP1Q96BH3 223 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 DPH3Q96FX2 82 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 Q9H521 79 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 COMMD3Q9UBI1 195 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 METTL1Q9UBP6 276 aaKnown RBP4.23□□□□□ -1.73
VPS29-210ENST00000552130 HLA-DRB4X5D2U9 266 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 MYOM2P54296 1465 aa4.23□□□□□ -1.73
VPS29-210ENST00000552130 NUP205Q92621 2012 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 ZFYVE16Q7Z3T8 1539 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 IGHV1-69P01742 117 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 IGHV3-7P01780 117 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 CD14P08571 375 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 PYYP10082 97 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 BRS3P32247 399 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 KISS1Q15726 138 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 GFI1BQ5VTD9 330 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 EIF5AL1Q6IS14 154 aaKnown RBP4.22□□□□□ -1.73
VPS29-210ENST00000552130 ZNF322Q6U7Q0 402 aaPredicted RBP4.22□□□□□ -1.73
VPS29-210ENST00000552130 ZNF705AQ6ZN79 300 aaPredicted RBP4.22□□□□□ -1.73
VPS29-210ENST00000552130 TEN1Q86WV5 123 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 CNEP1R1Q8N9A8 125 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 MORN4Q8NDC4 146 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 OR10P1Q8NGE3 313 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 OR5D16Q8NGK9 328 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 ZNF714Q96N38 554 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 UPK3BQ9BT76 320 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 SPANXDQ9BXN6 97 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 TXNL4BQ9NX01 149 aaKnown RBP4.22□□□□□ -1.73
VPS29-210ENST00000552130 TAS2R8Q9NYW2 309 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 TMEM14AQ9Y6G1 99 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 V9GYS6 101 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 NCAPD3P42695 1498 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 CEP164Q9UPV0 1460 aa4.22□□□□□ -1.73
VPS29-210ENST00000552130 MYH7BA7E2Y1 1941 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 LECT2O14960 151 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 MPC2O95563 127 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 TMEM258P61165 79 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 CATR1Q13166 79 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 HIGD2BQ4VC39 106 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 TMEM155Q4W5P6 130 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 PABPC1L2AQ5JQF8 200 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 ZFP2Q6ZN57 461 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 TMEM91Q6ZNR0 172 aa4.21□□□□□ -1.74
VPS29-210ENST00000552130 RBMXL1Q96E39 390 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms