RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ARPC1AQ92747 370 aa3.72□□□□□ -1.81
SCAF11-212ENST00000549162 BPESC1Q9GZL8 116 aa3.72□□□□□ -1.81
SCAF11-212ENST00000549162 ABCA2Q9BZC7 2435 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 SPRY3O43610 288 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 OR2J3O76001 311 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 IGKV1-17P01599 117 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 CEBPDP49716 269 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-212ENST00000549162 CD81P60033 236 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 ZNRF1Q8ND25 227 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 FMC1Q96HJ9 113 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 CHRDL1Q9BU40 450 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 PARP12Q9H0J9 701 aaKnown RBP3.71□□□□□ -1.82
SCAF11-212ENST00000549162 TREM1Q9NP99 234 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 VPS13DQ5THJ4 4388 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 WDFY3Q8IZQ1 3526 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 PSG9Q00887 426 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF695Q8IW36 515 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 TM2D2Q9BX73 214 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 OR2S2Q9NQN1 319 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 THYN1Q9P016 225 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 FLVCR2Q9UPI3 526 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 HECTD4Q9Y4D8 3996 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 A0A1B0GXF2 115 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 C9orf118A6NHY6 69 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 GOSR2O14653 212 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 IGLV2-8P01709 118 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 CTRLP40313 264 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 RPL27AP46776 148 aaKnown RBP3.71□□□□□ -1.82
SCAF11-212ENST00000549162 SLC9A3R2Q15599 337 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 ACOT6Q3I5F7 207 aaPredicted RBP3.71□□□□□ -1.82
SCAF11-212ENST00000549162 PSMG4Q5JS54 123 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 BOD1L2Q8IYS8 172 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 Q9H8V8 135 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 OSTCQ9NRP0 149 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 ZFP30Q9Y2G7 519 aa3.71□□□□□ -1.82
SCAF11-212ENST00000549162 RANBP2P49792 3224 aaKnown RBP3.71□□□□□ -1.82
SCAF11-212ENST00000549162 DOCK11Q5JSL3 2073 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 CTSGP08311 255 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ATP6V0CP27449 155 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 PPP1CCP36873 323 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SRP14P37108 136 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 LSM3P62310 102 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 IAH1Q2TAA2 248 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ABCA11PQ4W5N1 156 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 MORN3Q6PF18 240 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 PATE2Q6UY27 113 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 H2BFWTQ7Z2G1 175 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SNX29P2Q8IUI4 249 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 OVOL2Q9BRP0 275 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 C11orf68Q9H3H3 251 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 HEATR1Q9H583 2144 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 IGKV1OR2-108A0A075B7D4 117 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 TRAV26-1A0A087WT03 109 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 KIR2DL5BA0A0G2JN68 375 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 KIR2DL5BA0A0G2JPC4 375 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SMIM27A0A1W2PRY6 76 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 M0R381 172 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 HSPB6O14558 160 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 IGHV4-59P01825 116 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ERHP84090 104 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 TMEM267Q0VDI3 215 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 COTL1Q14019 142 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 FREM1Q5H8C1 2179 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF787Q6DD87 383 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 IL17RELQ6ZVW7 336 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 VKORC1L1Q8N0U8 176 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 KIR2DL5AQ8N109 375 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 KIR2DL5BQ8NHK3 375 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 MCRIP2Q9BUT9 160 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 CCL24O00175 119 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 PFDN1O60925 122 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SRP19P09132 144 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SAA4P35542 130 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SLAQ13239 276 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 ICAM4Q14773 271 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 SRSF12Q8WXF0 261 aaKnown RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 EEF1AKMT3Q96AZ1 226 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 FNDC4Q9H6D8 234 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 HRNRQ86YZ3 2850 aaPredicted RBP3.7□□□□□ -1.82
SCAF11-212ENST00000549162 DNAH8Q96JB1 4490 aa3.7□□□□□ -1.82
SCAF11-212ENST00000549162 RIPPLY3P57055 190 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 ZNF616Q08AN1 781 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 ATXN7L3Q14CW9 347 aaPredicted RBP3.69□□□□□ -1.82
SCAF11-212ENST00000549162 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
SCAF11-212ENST00000549162 STX12Q86Y82 276 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 SLC39A9Q9NUM3 307 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 PSENENQ9NZ42 101 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 VAX2Q9UIW0 290 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 BUB3O43684 328 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 UFC1Q9Y3C8 167 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 IGHV3-9P01782 118 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 SLC38A11Q08AI6 406 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 UTF1Q5T230 341 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 RXFP4Q8TDU9 374 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 DCANP1Q8TF63 244 aa3.69□□□□□ -1.82
SCAF11-212ENST00000549162 MFFQ9GZY8 342 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms