RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.56
CACNB3-209ENST00000548860 CIARTQ8N365 385 aaPredicted RBP11.52□□□□□ -0.56
CACNB3-209ENST00000548860 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.56
CACNB3-209ENST00000548860 Q9UFV3 132 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 MYO18BQ8IUG5 2567 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 KMT2EQ8IZD2 1858 aa11.52□□□□□ -0.56
CACNB3-209ENST00000548860 IGHG3P01860 377 aa11.52□□□□□ -0.57
CACNB3-209ENST00000548860 OR52E5Q8NH55 327 aa11.52□□□□□ -0.57
CACNB3-209ENST00000548860 USP9XQ93008 2570 aaPredicted RBP11.52□□□□□ -0.57
CACNB3-209ENST00000548860 PPIAL4CA0A0B4J2A2 164 aa11.52□□□□□ -0.57
CACNB3-209ENST00000548860 PPIAL4GP0DN37 164 aa11.52□□□□□ -0.57
CACNB3-209ENST00000548860 IL4P05112 153 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 UQCRFS1P47985 274 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 KLRD1Q13241 179 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 BMPR1BO00238 502 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 HIST1H1EP10412 219 aaKnown RBP11.51□□□□□ -0.57
CACNB3-209ENST00000548860 PRRX1P54821 245 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 ADIPOQQ15848 244 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 SIAH2O43255 324 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
CACNB3-209ENST00000548860 PPIFP30405 207 aaKnown RBP11.51□□□□□ -0.57
CACNB3-209ENST00000548860 WT1-ASQ06250 92 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 OR4F17Q8NGA8 305 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 PAFAH1B2P68402 229 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 KCNS1Q96KK3 526 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 FBXL7Q9UJT9 491 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 CDC42EP3Q9UKI2 254 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 GOLT1BQ9Y3E0 138 aa11.51□□□□□ -0.57
CACNB3-209ENST00000548860 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-209ENST00000548860 M0R3E3 92 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 PIEZO1Q92508 2521 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 C20orf202A1L168 122 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 ZZEF1O43149 2961 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 ORM1P02763 201 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 TBR1Q16650 682 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
CACNB3-209ENST00000548860 COL12A1Q99715 3063 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 FCER1GP30273 86 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 PLA2G2CQ5R387 149 aa11.5□□□□□ -0.57
CACNB3-209ENST00000548860 FNDC4Q9H6D8 234 aaPredicted RBP11.5□□□□□ -0.57
CACNB3-209ENST00000548860 OR2J3O76001 311 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 NHLH1Q02575 133 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 RELQ04864 619 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-209ENST00000548860 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
CACNB3-209ENST00000548860 LINC00312Q9Y6C7 94 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 HLA-DQA1P01909 254 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 PPOXP50336 477 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 FOXL1Q12952 345 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 CSN1S1P47710 185 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 SLAQ13239 276 aa11.49□□□□□ -0.57
CACNB3-209ENST00000548860 OSR1Q8TAX0 266 aaPredicted RBP11.49□□□□□ -0.57
CACNB3-209ENST00000548860 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 H0YJW9 148 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 K7EQM0 130 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 TMEM116Q8NCL8 245 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 OR8B3Q8NGG8 313 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 RNASE6Q93091 150 aaKnown RBP11.48□□□□□ -0.57
CACNB3-209ENST00000548860 TIMD4Q96H15 378 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 SFXN3Q9BWM7 321 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 SMG1Q96Q15 3661 aaKnown RBP11.48□□□□□ -0.57
CACNB3-209ENST00000548860 A0A1W2PPI3 338 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 PRSS47A8MTI9 375 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 ZNF841Q6ZN19 808 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 KLHDC1Q8N7A1 406 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 Q9H3A6 140 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 TMEM14BQ9NUH8 114 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 ABCA2Q9BZC7 2435 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 F2RL2O00254 374 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
CACNB3-209ENST00000548860 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 AKAP13Q12802 2813 aa11.48□□□□□ -0.57
CACNB3-209ENST00000548860 CLEC3BP05452 202 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 C3orf79P0CE67 100 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 TM4SF20Q53R12 229 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
CACNB3-209ENST00000548860 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 TXNDC17Q9BRA2 123 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 UBTD1Q9HAC8 227 aa11.47□□□□□ -0.57
CACNB3-209ENST00000548860 A8MWL6 223 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 UNQ5815/PRO19632Q6UWF5 114 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 SLC25A48Q6ZT89 311 aaKnown RBP11.46□□□□□ -0.57
CACNB3-209ENST00000548860 C5orf17Q8NAS9 161 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 ZNF596Q8TC21 504 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 SCNM1Q9BWG6 230 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 AAMDCQ9H7C9 122 aa11.46□□□□□ -0.57
CACNB3-209ENST00000548860 MBD3L4A6NDZ8 208 aaPredicted RBP11.46□□□□□ -0.57
CACNB3-209ENST00000548860 MBD3L3A6NE82 208 aaPredicted RBP11.46□□□□□ -0.57
CACNB3-209ENST00000548860 MBD3L5A6NJ08 208 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms