RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ADAP1O75689 374 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 TCRBP04435 133 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 INAFM2P0DMQ5 153 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 GPX4P36969 197 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-217ENST00000548420 YPEL3P61236 119 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-217ENST00000548420 ID3Q02535 119 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 OR52B4Q8NGK2 314 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 COQ8AQ8NI60 647 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 RNF2Q99496 336 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 GINS3Q9BRX5 216 aa10.27□□□□□ -0.77
PTCH1-217ENST00000548420 MPTX1A8MV57 137 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 M0R2N4 97 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 SYNGR2O43760 224 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 CRYBB3P26998 211 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 RND2P52198 227 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 TIGITQ495A1 244 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 LILRB2Q8N423 598 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 OR1S2Q8NGQ3 325 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 MITD1Q8WV92 249 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 NPIPB3Q92617 1050 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 C20orf85Q9H1P6 137 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 BATF3Q9NR55 127 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 TBC1D24Q9ULP9 559 aa10.26□□□□□ -0.77
PTCH1-217ENST00000548420 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-217ENST00000548420 CD5P06127 495 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 OR10J1P30954 320 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 C4orf46Q504U0 113 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 OR4D5Q8NGN0 318 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 CIB3Q96Q77 187 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-217ENST00000548420 U3KQE9 123 aa10.25□□□□□ -0.77
PTCH1-217ENST00000548420 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 PRSS46E5RG02 174 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 IFNA4P05014 189 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 IAPPP10997 89 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 NPPCP23582 126 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 ASAH1Q13510 395 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 GAMTQ14353 236 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 ST8SIA2Q92186 375 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 MAGT1Q9H0U3 335 aa10.24□□□□□ -0.77
PTCH1-217ENST00000548420 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 IFNA21P01568 189 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 BMI1P35226 326 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 NANOS2P60321 138 aaKnown RBP10.23□□□□□ -0.77
PTCH1-217ENST00000548420 RAB11AP62491 216 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 ZNF846Q147U1 533 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 Q8WTZ3 238 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
PTCH1-217ENST00000548420 NUDT15Q9NV35 164 aa10.23□□□□□ -0.77
PTCH1-217ENST00000548420 TRAV6A0A075B6T7 132 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 OR4C46A6NHA9 309 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 WRBO00258 174 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 UPK1BO75841 260 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 DFFBO76075 338 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 TOMM40O96008 361 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 NKX2-1P43699 371 aaPredicted RBP10.22□□□□□ -0.77
PTCH1-217ENST00000548420 POLR2GP62487 172 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTCH1-217ENST00000548420 RPP30P78346 268 aaKnown RBP10.22□□□□□ -0.77
PTCH1-217ENST00000548420 IFITM3Q01628 133 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 TCF24Q7RTU0 167 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 ACY3Q96HD9 319 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 METTL26Q96S19 204 aa10.22□□□□□ -0.77
PTCH1-217ENST00000548420 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 FAM240BA0A1B0GVZ2 78 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 A0A1W2PS18 150 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 H2AFB2P0C5Z0 115 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 RD3LP0DJH9 198 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 PSG1P11464 419 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 PAX9P55771 341 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-217ENST00000548420 MZT2BQ6NZ67 158 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 ZNF431Q8TF32 576 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-217ENST00000548420 SMIM8Q96KF7 97 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.77
PTCH1-217ENST00000548420 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 IGHV3-66A0A0C4DH42 116 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 PMS2P5A8MQ11 134 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 SPRY2O43597 315 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 TCTAP57738 103 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-217ENST00000548420 IAH1Q2TAA2 248 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-217ENST00000548420 SPANXN5Q5MJ07 72 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 THAP8Q8NA92 274 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 ZBTB8BQ8NAP8 495 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-217ENST00000548420 C2CD4CQ8TF44 421 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 SLC35E1Q96K37 410 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 TRGV9Q99603 122 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 SEC22CQ9BRL7 303 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 GGTLC1Q9BX51 225 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 MS4A6AQ9H2W1 248 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 UBQLN2Q9UHD9 624 aa10.2□□□□□ -0.78
PTCH1-217ENST00000548420 STRAPQ9Y3F4 350 aaKnown RBP10.2□□□□□ -0.78
PTCH1-217ENST00000548420 LOC102724200A0A096LPH7 203 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-217ENST00000548420 IL4P05112 153 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms