RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 LHFPL4Q7Z7J7 247 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 BLNKQ8WV28 456 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 GSX1Q9H4S2 264 aaPredicted RBP12.36□□□□□ -0.43
BRF1-212ENST00000547562 SPTBN4Q9H254 2564 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 DDTP30046 118 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 COX19Q49B96 90 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 SRSF8Q9BRL6 282 aaKnown RBP12.36□□□□□ -0.43
BRF1-212ENST00000547562 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
BRF1-212ENST00000547562 COL6A6A6NMZ7 2263 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 I3L2K1 104 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 NBEAP1P0C6P0 100 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 IGLC1P0CG04 106 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 RNF224P0DH78 156 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 GP9P14770 177 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 LINC00310P59036 64 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 GNG5P63218 68 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 SLC35B1P78383 322 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 MMDQ15546 238 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 TMEM136Q6ZRR5 245 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 NAT8BQ9UHF3 227 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 EPDR1Q9UM22 224 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 SLC25A5P05141 298 aaKnown RBP12.35□□□□□ -0.43
BRF1-212ENST00000547562 ESDP10768 282 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 PAX1P15863 534 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 NHLH1Q02575 133 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 WNT10AQ9GZT5 417 aa12.35□□□□□ -0.43
BRF1-212ENST00000547562 CNIH1O95406 144 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
BRF1-212ENST00000547562 Q0VG73 95 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 ZNF664Q8N3J9 261 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 NEU4Q8WWR8 484 aaPredicted RBP12.34□□□□□ -0.43
BRF1-212ENST00000547562 FAM168AQ92567 244 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 SSBP3Q9BWW4 388 aaPredicted RBP12.34□□□□□ -0.43
BRF1-212ENST00000547562 HILPDAQ9Y5L2 63 aa12.34□□□□□ -0.43
BRF1-212ENST00000547562 LOC105371242A0A075B767 164 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 PGPA6NDG6 321 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 M0R1W7 72 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 SERF1AO75920 110 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 AMY1AP04745 511 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 PSG1P11464 419 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 UBE2G1P62253 170 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 SPTBN1Q01082 2364 aaKnown RBP12.33□□□□□ -0.43
BRF1-212ENST00000547562 CFHR4Q92496 578 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 MBD6Q96DN6 1003 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 MS4A10Q96PG2 267 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 HIGD1AQ9Y241 93 aa12.33□□□□□ -0.43
BRF1-212ENST00000547562 NBR2O15453 112 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 CEACAM3P40198 252 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 RAB4BP61018 213 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 ASPHD1Q5U4P2 390 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 LEMD1Q68G75 181 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
BRF1-212ENST00000547562 LYZP61626 148 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 KLRD1Q13241 179 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 MRPL54Q6P161 138 aaKnown RBP12.32□□□□□ -0.44
BRF1-212ENST00000547562 BAGE3Q86Y29 109 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 NUDT10Q8NFP7 164 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 NUDT11Q96G61 164 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 C14orf144Q96I85 54 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 C7orf69Q9H7B7 122 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 ODF3BA8MYP8 253 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 HLA-DQA1P01909 254 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 PRTN3P24158 256 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 TPPP2P59282 170 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
BRF1-212ENST00000547562 F2Z2F3 143 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 NDUFA3O95167 84 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 UNQ6494/PRO21346Q6UXR6 183 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 NPBQ8NG41 125 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 GRAMD2BQ96HH9 432 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 A0A1B0GV90 55 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 K7EIM0 57 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 SCGB1D1O95968 90 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 SSTP61278 116 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 PRR27Q6MZM9 219 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 NOL4LQ96MY1 436 aaPredicted RBP12.31□□□□□ -0.44
BRF1-212ENST00000547562 SLC25A39Q9BZJ4 359 aaPredicted RBP12.31□□□□□ -0.44
BRF1-212ENST00000547562 Q9H3A6 140 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 GNB4Q9HAV0 340 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 HIVEP3Q5T1R4 2406 aa12.31□□□□□ -0.44
BRF1-212ENST00000547562 IGKV1-17P01599 117 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 REC114Q7Z4M0 266 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 IGFBPL1Q8WX77 278 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 SGK494Q96LW2 274 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 GPR82Q96P67 336 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 CHRDL1Q9BU40 450 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 A8MWP6 167 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 H3BTX0 84 aa12.3□□□□□ -0.44
BRF1-212ENST00000547562 HIST1H1EP10412 219 aaKnown RBP12.3□□□□□ -0.44
BRF1-212ENST00000547562 CD24P25063 80 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms