RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 IGHV3OR16-8A0A075B7F1 116 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 TMEM190Q8WZ59 177 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 ASCL2Q99929 193 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 HELZP42694 1942 aaKnown RBP10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 FNDC10F2Z333 226 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 NDUFA3O95167 84 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 TCRAP04437 139 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 UBE2V1Q13404 147 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 SAMD13Q5VXD3 122 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 DPM2O94777 84 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 MYOD1P15172 320 aa10.04□□□□□ -0.8
NPC1L1-204ENST00000546276 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 LINC01560Q8TB33 94 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 CRXO43186 299 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 ADIPOQQ15848 244 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 RSPO1Q2MKA7 263 aaPredicted RBP10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 MPV17L2Q567V2 206 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 TMEM167AQ8TBQ9 72 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 IGKV3-15P01624 115 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 CDKN1AP38936 164 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 PRSS8Q16651 343 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 PRR31Q5SQ13 230 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 ZCCHC24Q8N2G6 241 aaKnown RBP10.03□□□□□ -0.8
NPC1L1-204ENST00000546276 MLNRO43193 412 aa10.02□□□□□ -0.8
NPC1L1-204ENST00000546276 IGLV3-1P01715 115 aa10.02□□□□□ -0.8
NPC1L1-204ENST00000546276 UCNP55089 124 aa10.02□□□□□ -0.8
NPC1L1-204ENST00000546276 TRGV9Q99603 122 aa10.02□□□□□ -0.8
NPC1L1-204ENST00000546276 PLSCR4Q9NRQ2 329 aa10.02□□□□□ -0.8
NPC1L1-204ENST00000546276 BEX4Q9NWD9 120 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 TRGV3P03979 118 aa10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 TNFRSF14Q92956 283 aa10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 SLC50A1Q9BRV3 221 aa10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 MRPS16Q9Y3D3 137 aaKnown RBP10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 IGKV1D-17A0A075B6S4 117 aa10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 PRB3Q04118 309 aaPredicted RBP10.02□□□□□ -0.81
NPC1L1-204ENST00000546276 APOMO95445 188 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 CIRBPQ14011 172 aaKnown RBP10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 TMEM105Q8N8V8 129 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 PSG1P11464 419 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 RIPPLY3P57055 190 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 CLEC2AQ6UVW9 174 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 IGKCP01834 107 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 ERVK11-1P61568 191 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 C19orf54Q5BKX5 351 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
NPC1L1-204ENST00000546276 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
NPC1L1-204ENST00000546276 CLEC19AQ6UXS0 136 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 SLC25A39Q9BZJ4 359 aaPredicted RBP10□□□□□ -0.81
NPC1L1-204ENST00000546276 PMS2P5A8MQ11 134 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 SFTPCP11686 197 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 LY6EQ16553 131 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 D6R8Y8 96 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 H0YJW9 148 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 SRSF1Q07955 248 aaKnown RBP eCLIP10□□□□□ -0.81
NPC1L1-204ENST00000546276 ZNF329Q86UD4 541 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 DMRTC2Q8IXT2 367 aaPredicted RBP10□□□□□ -0.81
NPC1L1-204ENST00000546276 SAMD5Q5TGI4 173 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 DDB2Q92466 427 aa10□□□□□ -0.81
NPC1L1-204ENST00000546276 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
NPC1L1-204ENST00000546276 ZNF318Q5VUA4 2279 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 A0A087X0K7 114 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 GUSBP1Q15486 140 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 RPRMLQ8N4K4 120 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 MDS2Q8NDY4 140 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 SLC25A15Q9Y619 301 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 F2Z2F3 143 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 LMO1P25800 156 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 TMEM200BQ69YZ2 307 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 FAM71F2Q6NXP2 309 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 Q6ZWC4 215 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 SMPXQ9UHP9 88 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 CEACAM4O75871 244 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 CYYR1Q96J86 154 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 COX11Q9Y6N1 276 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 A0A0G2JLM5 398 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 TIMM23O14925 209 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 EVI2AP22794 236 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 C18orf32Q8TCD1 76 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 ZNF479Q96JC4 524 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 LINC00479Q96M42 142 aa9.99□□□□□ -0.81
NPC1L1-204ENST00000546276 TOMM40O96008 361 aa9.98□□□□□ -0.81
NPC1L1-204ENST00000546276 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
NPC1L1-204ENST00000546276 TMPRSS3P57727 454 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms