RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 C1RLQ9NZP8 487 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 ASPMQ8IZT6 3477 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 LOC400499M0QZD8 3231 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 PIGBOS1A0A0B4J2F0 54 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 CCDC179H3BU77 68 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 ZNF137PP52743 207 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 HOXA4Q00056 320 aaPredicted RBP6.42□□□□□ -1.38
UBR1-202ENST00000546274 PLP2Q04941 152 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 ZNF146Q15072 292 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 Q6ZUT4 128 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 GRAMD2BQ96HH9 432 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 CDIP1Q9H305 208 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 C12orf49Q9H741 205 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 NHP2Q9NX24 153 aaKnown RBP6.42□□□□□ -1.38
UBR1-202ENST00000546274 C9JCJ5 164 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 ACTL6BO94805 426 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 NCR2O95944 276 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 GCHFRP30047 84 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 RPL30P62888 115 aaKnown RBP6.42□□□□□ -1.38
UBR1-202ENST00000546274 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 ZNF766Q5HY98 468 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 Q6ZR03 302 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 TTC9CQ8N5M4 171 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 OSTCQ9NRP0 149 aa6.42□□□□□ -1.38
UBR1-202ENST00000546274 NBEAQ8NFP9 2946 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 PSPNO60542 156 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CT45A6P0DMU7 189 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CT45A5P0DMU8 189 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CT45A7P0DMV0 189 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 GPR12P47775 334 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 FXYD2P54710 66 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 KLF5Q13887 457 aaPredicted RBP6.41□□□□□ -1.38
UBR1-202ENST00000546274 CR1LQ2VPA4 569 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CT45A1Q5HYN5 189 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 PCP2Q8IVA1 136 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 C3orf56Q8N813 242 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CT45A3Q8NHU0 189 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 ABHD17AQ96GS6 310 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 HEYLQ9NQ87 328 aaPredicted RBP6.41□□□□□ -1.38
UBR1-202ENST00000546274 IGHV3-64DA0A0J9YX35 117 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 CDX4O14627 284 aaPredicted RBP6.41□□□□□ -1.38
UBR1-202ENST00000546274 FGF6P10767 208 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 G6PCP35575 357 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 PSG5Q15238 335 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 ZNF718Q3SXZ3 478 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 PIP4P1Q86T03 277 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 BCL6BQ8N143 479 aaPredicted RBP6.41□□□□□ -1.38
UBR1-202ENST00000546274 FAM169BQ8N8A8 192 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 NUP35Q8NFH5 326 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 RAB1CQ92928 201 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 RAB1BQ9H0U4 201 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 INSIG2Q9Y5U4 225 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 LINC00312Q9Y6C7 94 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 USF3Q68DE3 2245 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 OTOGLQ3ZCN5 2332 aa6.41□□□□□ -1.38
UBR1-202ENST00000546274 TM4SF5O14894 197 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 ABHD17BQ5VST6 288 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GCSAMQ8N6F7 178 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 TEX29Q8N6K0 151 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 ZNF645Q8N7E2 425 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 TXNDC17Q9BRA2 123 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 RTL8AQ9BWD3 113 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE12JA6NER3 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 SMAD7O15105 426 aaKnown RBP6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE7O76087 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 OR5AL1P0C617 328 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE12FP0CL80 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE12GP0CL81 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE12IP0CL82 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
UBR1-202ENST00000546274 GAGE4Q13068 117 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 ZFAND6Q6FIF0 208 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 Q8IYB0 196 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 Q8N7P7 452 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 GTSF1Q8WW33 167 aa6.4□□□□□ -1.38
UBR1-202ENST00000546274 DSPP15924 2871 aaKnown RBP6.4□□□□□ -1.39
UBR1-202ENST00000546274 C12orf77C9JDV5 145 aa6.4□□□□□ -1.39
UBR1-202ENST00000546274 MBNL2Q5VZF2 373 aaKnown RBP6.4□□□□□ -1.39
UBR1-202ENST00000546274 TMEM178AQ8NBL3 297 aa6.4□□□□□ -1.39
UBR1-202ENST00000546274 MDS2Q8NDY4 140 aa6.4□□□□□ -1.39
UBR1-202ENST00000546274 LINC00479Q96M42 142 aa6.4□□□□□ -1.39
UBR1-202ENST00000546274 PRELID3AQ96N28 172 aa6.4□□□□□ -1.39
UBR1-202ENST00000546274 TET2Q6N021 2002 aaPredicted RBP6.39□□□□□ -1.39
UBR1-202ENST00000546274 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 A8MWL6 223 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 WISP2O76076 250 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 TFF1P04155 84 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 CD59P13987 128 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 MEOX1P50221 254 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 FHL3Q13643 280 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 LCNL1Q6ZST4 164 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 C11orf53Q8IXP5 236 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 SPXQ9BT56 116 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
UBR1-202ENST00000546274 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms