RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	TVP23B	Q9NYZ1	205 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	PIK3C2G	O75747	1445 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639		J3QRK9	145 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	SRI	P30626	198 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	MYL6	P60660	151 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	SRSF6	Q13247	344 aa	Known RBP	0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	TMEM97	Q5BJF2	176 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639		Q8N6K4	173 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	OR52L1	Q8NGH7	329 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	OR51A2	Q8NGJ7	313 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	C6orf62	Q9GZU0	229 aa	Predicted RBP	0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	TMEM133	Q9H2Q1	129 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	C14orf132	Q9NPU4	83 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	GLTP	Q9NZD2	209 aa		0.66	□□□□□ -2.3
RAP1B-231	ENST00000544639	MYO3B	Q8WXR4	1341 aa		0.65	□□□□□ -2.3
RAP1B-231	ENST00000544639	NCOA1	Q15788	1441 aa		0.65	□□□□□ -2.3
RAP1B-231	ENST00000544639	MYH10	P35580	1976 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	KIAA1549	Q9HCM3	1950 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	SCN8A	Q9UQD0	1980 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	ANP32A	P39687	249 aa	Known RBP	0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	DEFA3	P59666	94 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	RHOB	P62745	196 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	KRTAP19-3	Q7Z4W3	81 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	OR2T10	Q8NGZ9	312 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	ITFG2	Q969R8	447 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	PPP1R14B	Q96C90	147 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	SLAMF6	Q96DU3	332 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	FBXO5	Q9UKT4	447 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	CASP8AP2	Q9UKL3	1982 aa		0.65	□□□□□ -2.31
RAP1B-231	ENST00000544639	HEATR1	Q9H583	2144 aa	Known RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	ASCC3	Q8N3C0	2202 aa	Known RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	AHNAK	Q09666	5890 aa	Known RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	CCL25	O15444	150 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	CYB5B	O43169	146 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	RNASE4	P34096	147 aa	Known RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	CDKN2C	P42773	168 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639		Q8IYB0	196 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	FAM172A	Q8WUF8	416 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	BORCS5	Q969J3	196 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	PRAP1	Q96NZ9	151 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	PRADC1	Q9BSG0	188 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	RTL1	A6NKG5	1358 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	MYH7B	A7E2Y1	1941 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	ARHGEF28	Q8N1W1	1705 aa	Known RBP	0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	CCDC144A	A2RUR9	1427 aa		0.64	□□□□□ -2.31
RAP1B-231	ENST00000544639	OBSL1	O75147	1896 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	GADD45G	O95257	159 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	DHFR	P00374	187 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	DYNLT1	P63172	113 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	CCL7	P80098	99 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	SBSPON	Q8IVN8	264 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	PATE1	Q8WXA2	126 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	SLC22A13	Q9Y226	551 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	RIMBP3C	A6NJZ7	1639 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	RIMBP3B	A6NNM3	1639 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	RIMBP3	Q9UFD9	1639 aa		0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	ZFC3H1	O60293	1989 aa	Known RBP	0.63	□□□□□ -2.31
RAP1B-231	ENST00000544639	CCL16	O15467	120 aa		0.62	□□□□□ -2.31
RAP1B-231	ENST00000544639	EIF5A	P63241	154 aa	Known RBP	0.62	□□□□□ -2.31
RAP1B-231	ENST00000544639	SPRN	Q5BIV9	151 aa		0.62	□□□□□ -2.31
RAP1B-231	ENST00000544639	SLC30A7	Q8NEW0	376 aa		0.62	□□□□□ -2.31
RAP1B-231	ENST00000544639	TMEM70	Q9BUB7	260 aa		0.62	□□□□□ -2.31
RAP1B-231	ENST00000544639	TMEM114	B3SHH9	223 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	NCR3	O14931	201 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	OR7C1	O76099	320 aa	Predicted RBP	0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	PSG9	Q00887	426 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	FAM74A1	Q5RGS3	127 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	LYRM7	Q5U5X0	104 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	OR2T35	Q8NGX2	323 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	TMEM254	Q8TBM7	123 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	STAG3L4	Q8TBR4	150 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	SIGMAR1	Q99720	223 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	UCK1	Q9HA47	277 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	PARVB	Q9HBI1	364 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	MYO18A	Q92614	2054 aa	Known RBP	0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	UNC13C	Q8NB66	2214 aa		0.61	□□□□□ -2.31
RAP1B-231	ENST00000544639	TRAV4	A0A0B4J268	109 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	TRBV6-4	A0A1B0GX49	114 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	TCRBV4S1A1T	A0A5B7	111 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	SRP14	P37108	136 aa	Known RBP	0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	RRN3P1	Q2M238	152 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	GNPDA2	Q8TDQ7	276 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	GPER1	Q99527	375 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	TMEM126A	Q9H061	195 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	TLNRD1	Q9H1K6	362 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	PEAK1	Q9H792	1746 aa		0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639	COL1A1	P02452	1464 aa	Predicted RBP	0.6	□□□□□ -2.31
RAP1B-231	ENST00000544639		E9PCH4	1651 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	CHD3	Q12873	2000 aa	Known RBP	0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	TIMM17B	O60830	172 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	DNAL4	O96015	105 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	ERP29	P30040	261 aa	Known RBP	0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	SERPINB9	P50453	376 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	PIGP	P57054	158 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	KRR1	Q13601	381 aa	Known RBP	0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	PDZD9	Q8IXQ8	264 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	ST6GALNAC3	Q8NDV1	305 aa		0.59	□□□□□ -2.31
RAP1B-231	ENST00000544639	OR11H6	Q8NGC7	330 aa		0.59	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms