RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 FAM167A-AS1Q96KT0 104 aa10.75□□□□□ -0.69
HCFC2-202ENST00000544223 NOL4LQ96MY1 436 aaPredicted RBP10.75□□□□□ -0.69
HCFC2-202ENST00000544223 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 BLNKQ8WV28 456 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 MANBALQ9NQG1 85 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 TRBV20OR9-2A0A075B6H5 130 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 IL17RELQ6ZVW7 336 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 C5orf56Q8N8D9 126 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 KCNIP2Q9NS61 270 aa10.74□□□□□ -0.69
HCFC2-202ENST00000544223 ZFP82Q8N141 532 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 NECAP1Q8NC96 275 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 SGK494Q96LW2 274 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 OTOGQ6ZRI0 2925 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
HCFC2-202ENST00000544223 SMAD7O15105 426 aaKnown RBP10.73□□□□□ -0.69
HCFC2-202ENST00000544223 TMEM95Q3KNT9 176 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 MRPL41Q8IXM3 137 aaKnown RBP10.73□□□□□ -0.69
HCFC2-202ENST00000544223 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 SMDT1Q9H4I9 107 aa10.73□□□□□ -0.69
HCFC2-202ENST00000544223 COLCA2A8K830 154 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 UBE2L3P68036 154 aaKnown RBP10.72□□□□□ -0.69
HCFC2-202ENST00000544223 ETFRF1Q6IPR1 90 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 LINC01356Q8N9X3 169 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 PSMG3-AS1Q96PY0 264 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 TECRQ9NZ01 308 aaKnown RBP10.72□□□□□ -0.69
HCFC2-202ENST00000544223 HLA-DRB1P01911 266 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 C8orf88P0DMB2 117 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 SLC25A16P16260 332 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
HCFC2-202ENST00000544223 Q56UQ5 140 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 CHRDL1Q9BU40 450 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 SDF2L1Q9HCN8 221 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 FBXL7Q9UJT9 491 aa10.72□□□□□ -0.69
HCFC2-202ENST00000544223 IGHV4-59P01825 116 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 PAX1P15863 534 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 CRYBB3P26998 211 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 DEFB112Q30KQ8 113 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 C1RLQ9NZP8 487 aa10.71□□□□□ -0.69
HCFC2-202ENST00000544223 OR2C1O95371 312 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 RD3LP0DJH9 198 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 IGHV4-31P0DP07 118 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 TMEM249Q2WGJ8 235 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 RNF212Q495C1 297 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 TRGV9Q99603 122 aa10.71□□□□□ -0.7
HCFC2-202ENST00000544223 CORTO00230 105 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 GNG7O60262 68 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 CLN5O75503 358 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 IL4P05112 153 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 DSCR9P59020 149 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 RANP62826 216 aaKnown RBP10.7□□□□□ -0.7
HCFC2-202ENST00000544223 RPL23P62829 140 aaKnown RBP10.7□□□□□ -0.7
HCFC2-202ENST00000544223 C15orf32Q32M92 178 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 SGMS2Q8NHU3 365 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 C2CD4CQ8TF44 421 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 SMCO4Q9NRQ5 59 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
HCFC2-202ENST00000544223 NPIPB5A8MRT5 1133 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 GNG5P63218 68 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 TMEM241Q24JQ0 296 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 C16orf82Q7Z2V1 217 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 C17orf77Q96MU5 243 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 PAXXQ9BUH6 204 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 ELOVL1Q9BW60 279 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 SELENOKQ9Y6D0 94 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 TGIF2-C20orf24A0A0A6YYL0 155 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 HYPMO75409 117 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 CRYBA1P05813 215 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 GPR183P32249 361 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 RHOGP84095 191 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 HIST1H2BAQ96A08 127 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 ASCL2Q99929 193 aa10.69□□□□□ -0.7
HCFC2-202ENST00000544223 IGHV3OR16-13A0A075B7E8 117 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 IGHV3-74A0A0B4J1X5 117 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 TRAV34A0A0B4J273 112 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 CXCL1P09341 107 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 PMS2P11Q13670 270 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 RHEBQ15382 184 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 USF2Q15853 346 aaPredicted RBP10.68□□□□□ -0.7
HCFC2-202ENST00000544223 FXYD5Q96DB9 178 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 OR51M1Q9H341 326 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 C21orf62Q9NYP8 219 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 MOB4Q9Y3A3 225 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 TMEM250H0YL14 139 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 ADMP35318 185 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 BPIFB3P59826 476 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 SELENOTP62341 195 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 Q71RC1 249 aaPredicted RBP10.68□□□□□ -0.7
HCFC2-202ENST00000544223 NANPQ8TBE9 248 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 MEGF9Q9H1U4 602 aa10.68□□□□□ -0.7
HCFC2-202ENST00000544223 FLNBO75369 2602 aaKnown RBP10.68□□□□□ -0.7
HCFC2-202ENST00000544223 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms