RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 BOLA2-SMG1P6H3BVE0 249 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 H7BYZ3 331 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 I3L2K1 104 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 K7EQD1 137 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 M0R2T5 61 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 UPK2O00526 184 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 GSTZ1O43708 216 aaPredicted RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 DUSP14O95147 198 aaKnown RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 TMEM50AO95807 157 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TSPAN13O95857 204 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 LALBAP00709 142 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 CDK1P06493 297 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 CD37P11049 281 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 FCGR1AP12314 374 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 MYL12AP19105 171 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 ETV1P50549 477 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 CNN1P51911 297 aaKnown RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 CRYBA4P53673 196 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TMEM50BP56557 158 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 RPL30P62888 115 aaKnown RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 QRFPP83859 136 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 LAGE3Q14657 143 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TMEM183BQ1AE95 376 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TIGITQ495A1 244 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 DNAL1Q4LDG9 190 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 HSP90B2PQ58FF3 399 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TOR2AQ5JU69 321 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 C1orf100Q5SVJ3 147 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 AMTNQ6UX39 209 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TMEM183AQ8IXX5 376 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 FAM89BQ8N5H3 189 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 NHLRC2Q8NBF2 726 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 OR1P1Q8NH06 330 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 RHOXF1Q8NHV9 184 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 CENPNQ96H22 339 aaPredicted RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 ARHGAP5-AS1Q96IT6 56 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 LINC00479Q96M42 142 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TMEM56Q96MV1 263 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 DERL3Q96Q80 235 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 URM1Q9BTM9 101 aaKnown RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 CENPOQ9BU64 300 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 PECRQ9BY49 303 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 SLC25A39Q9BZJ4 359 aaPredicted RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 WDR12Q9GZL7 423 aaKnown RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 FGF20Q9NP95 211 aaPredicted RBP2.03□□□□□ -2.08
CHD4-209ENST00000542717 OAZ3Q9UMX2 235 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 FUT9Q9Y231 359 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 AP4S1Q9Y587 144 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 ORC6Q9Y5N6 252 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 IRGMA1A4Y4 181 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 SAC3D1A6NKF1 404 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 GGTLC3B5MD39 225 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 EI24O14681 340 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 GYG2O15488 501 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 SLC22A5O76082 557 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 IGLV2-14P01704 120 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 HLA-DQB1P01920 261 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 CD1AP06126 327 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 FCGR3AP08637 254 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 FGF2P09038 288 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 LORP23490 312 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 MAPK3P27361 379 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 DCKP27707 260 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 BRWD1-AS2P59051 145 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 ERVK-16P61578 105 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 EIF4EBP1Q13541 118 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 ZNF846Q147U1 533 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 ZIK1Q3SY52 487 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 SPINK9Q5DT21 86 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 PLAC9Q5JTB6 97 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 SAMD13Q5VXD3 122 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 DPPA3Q6W0C5 159 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 H1FOOQ8IZA3 346 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 CCDC71LQ8N9Z2 235 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 ZNF485Q8NCK3 441 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 ZNF555Q8NEP9 628 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 OR6F1Q8NGZ6 308 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 LYPD6BQ8NI32 183 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 Q8WTZ3 238 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 PHYHIPQ92561 330 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 GPR146Q96CH1 333 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 SLC7A6OSQ96CW6 309 aaPredicted RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 SLC35E1Q96K37 410 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 HSD17B10Q99714 261 aaKnown RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 DCSTAMPQ9H295 470 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 KCNK15Q9H427 330 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 TMEM140Q9NV12 185 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 TAS2R8Q9NYW2 309 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 DIMT1Q9UNQ2 313 aaKnown RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 KCNK7Q9Y2U2 307 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 RBMX2Q9Y388 322 aaKnown RBP2.02□□□□□ -2.09
CHD4-209ENST00000542717 URGCP-MRPS24S4R325 110 aa2.02□□□□□ -2.09
CHD4-209ENST00000542717 TRAV1-1A0A0B4J248 108 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 PNMA8CA0A1B0GUJ8 204 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 LOC100130705A0A1B0GUX0 176 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 ERICH4A6NGS2 130 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 SULT1C2O00338 296 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 RBFOX2O43251 390 aaKnown RBP eCLIP2.01□□□□□ -2.09
CHD4-209ENST00000542717 BUB3O43684 328 aa2.01□□□□□ -2.09
CHD4-209ENST00000542717 SNAPC5O75971 98 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms