RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR1L4Q8NGR5 311 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 SNRNP40Q96DI7 357 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 KCNIP1Q9NZI2 227 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 POLDIP2Q9Y2S7 368 aa6.52□□□□□ -1.37
PDLIM5-221ENST00000542407 APC2O95996 2303 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 SCO2A0A1W2PP80 73 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ENSAO43768 121 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 SLC25A6P12236 298 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 FABP6P51161 128 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 HOXA4Q00056 320 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 MMD2Q8IY49 270 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 UBALD1Q8TB05 177 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 IL36BQ9NZH7 164 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 KCNS2Q9ULS6 477 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 CUL9Q8IWT3 2517 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 IGHV3-64DA0A0J9YX35 117 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 C7orf71A4D174 169 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 J3QL48 77 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ACTL6BO94805 426 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 OR2H2O95918 312 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 EDDM3BP56851 147 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 FAM27E3Q08E93 113 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 OR1L1Q8NH94 360 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 RDH5Q92781 318 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 CXXC4Q9H2H0 198 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 RAXQ9Y2V3 346 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 TRAV9-2A0A087WT02 112 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 KIR2DS1A0A191URI9 304 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 C15orf65H3BRN8 121 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 KIR2DS1Q14954 304 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 RPEL1Q2QD12 228 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF718Q3SXZ3 478 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 PCSK4Q6UW60 755 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 C12orf54Q6X4T0 127 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF497Q6ZNH5 498 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 FAM19A5Q7Z5A7 132 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF439Q8NDP4 499 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 OR10P1Q8NGE3 313 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 OR2K2Q8NGT1 345 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 OR13C6PQ8NH95 151 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 C8orf46Q8TAG6 207 aa6.51□□□□□ -1.37
PDLIM5-221ENST00000542407 C17orf112F2Z3M2 114 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 M0R1B8 84 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 IGKV1-5P01602 117 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 GRPP07492 148 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF826PQ6ZT77 177 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 TTC9CQ8N5M4 171 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 OR5AN1Q8NGI8 311 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 DDB2Q92466 427 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 NEUROG1Q92886 237 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 JMJD8Q96S16 334 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 PRRG2O14669 202 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 WNT9BO14905 357 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 HSBP1O75506 76 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 IGHV3-13P01766 116 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 LGALS4P56470 323 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 FXYD3Q14802 87 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 PMCHL1Q16048 86 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 GFRALQ6UXV0 394 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF841Q6ZN19 808 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 NPCDR1Q9BY65 106 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 CDIP1Q9H305 208 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 TIMM9Q9Y5J7 89 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 V9GYY9 64 aa6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 URB1O60287 2271 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-221ENST00000542407 CEP295Q9C0D2 2601 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 CACNA1DQ01668 2161 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 PRR14LQ5THK1 2151 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 IGLV3-9A0A075B6K5 115 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 MGST1P10620 155 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 CA7P43166 264 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 ANXA2RQ3ZCQ2 193 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 SPRNQ5BIV9 151 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 DUX4L9Q6RFH8 374 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 TMEM147Q9BVK8 224 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 KCNIP2Q9NS61 270 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 FAM90A27PA6NNH2 459 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 VWC2LB2RUY7 222 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 NPIPB11E5RHQ5 1161 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 PSPNO60542 156 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 GATA2P23769 480 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 ACP7Q6ZNF0 438 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 MBD6Q96DN6 1003 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 DUX3Q96PT4 197 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
PDLIM5-221ENST00000542407 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms