RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ACY3Q96HD9 319 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 TMEM208Q9BTX3 173 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 COMMD3Q9UBI1 195 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 KLK11Q9UBX7 282 aa8.71□□□□□ -1.02
SNHG1-216ENST00000541416 FABP1P07148 127 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 UCP1P25874 307 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 FXYD7P58549 80 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 PSG9Q00887 426 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 SP6Q3SY56 376 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 AARDQ4LEZ3 155 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 OR8G2PQ6IF36 304 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 NPIPB3Q92617 1050 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 RNF125Q96EQ8 232 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 MAGT1Q9H0U3 335 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 VCX3AQ9NNX9 186 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
SNHG1-216ENST00000541416 LRP1BQ9NZR2 4599 aa8.7□□□□□ -1.02
SNHG1-216ENST00000541416 TNFAIP8O95379 198 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 PSG1P11464 419 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 RORCP51449 518 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 C1orf194Q5T5A4 169 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 LHFPL1Q86WI0 220 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 TERB2Q8NHR7 220 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 ABHD1Q96SE0 405 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 PBDC1Q9BVG4 233 aa8.69□□□□□ -1.02
SNHG1-216ENST00000541416 NACAE9PAV3 2078 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 ISLRO14498 428 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 MEOX2P50222 304 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 PAX9P55771 341 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 CCL18P55774 89 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 SUPT4H1P63272 117 aaKnown RBP8.68□□□□□ -1.02
SNHG1-216ENST00000541416 TNP2Q05952 138 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 ZNF709Q8N972 641 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 RBPMSQ93062 196 aaKnown RBP8.68□□□□□ -1.02
SNHG1-216ENST00000541416 PPP1R14BQ96C90 147 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 TMEM222Q9H0R3 208 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 RPRMQ9NS64 109 aa8.68□□□□□ -1.02
SNHG1-216ENST00000541416 C14orf166Q9Y224 244 aaKnown RBP8.68□□□□□ -1.02
SNHG1-216ENST00000541416 A0A0G2JRQ6 117 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 TEX13DA0A0J9YY54 714 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-216ENST00000541416 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 LYRM9A8MSI8 78 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 GABARAPH6UMI1 98 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 GABARAPO95166 117 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 CDS2O95674 445 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 CD3DP04234 171 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 TGFBR1P36897 503 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 B2MP61769 119 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 LSM3P62310 102 aaKnown RBP8.67□□□□□ -1.02
SNHG1-216ENST00000541416 KLF9Q13886 244 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-216ENST00000541416 ZNF79Q15937 498 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 SCGB2B2Q4G0G5 96 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 OR13C8Q8NGS7 320 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 C15orf40Q8WUR7 153 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 CACNG5Q9UF02 275 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 U3KQ87 197 aa8.67□□□□□ -1.02
SNHG1-216ENST00000541416 FAM25AB3EWG3 89 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 FAM25CB3EWG5 89 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 FAM25GB3EWG6 89 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 OR5AC1P0C628 307 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 ATP5IP56385 69 aaPredicted RBP8.66□□□□□ -1.02
SNHG1-216ENST00000541416 FAM78BQ5VT40 261 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 MZT2AQ6P582 158 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 OR8I2Q8N0Y5 310 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 Q8N1X5 172 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
SNHG1-216ENST00000541416 WDR12Q9GZL7 423 aaKnown RBP8.66□□□□□ -1.02
SNHG1-216ENST00000541416 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.02
SNHG1-216ENST00000541416 A0A0J9YX75 114 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 SNRPGP15A8MWD9 76 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 SULT1A3P0DMM9 295 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 SULT1A4P0DMN0 295 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 ELK1P19419 428 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 S100A7P31151 101 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 TAS2R19P59542 299 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 DEFB1P60022 68 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 RNASE12Q5GAN4 147 aaKnown RBP8.65□□□□□ -1.02
SNHG1-216ENST00000541416 NMSQ5H8A3 153 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 TMEM268Q5VZI3 342 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 C1orf158Q8N1D5 194 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 AP3S1Q92572 193 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 SLC35E1Q96K37 410 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 DOK5Q9P104 306 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 MTFP1Q9UDX5 166 aa8.65□□□□□ -1.02
SNHG1-216ENST00000541416 HPGDSO60760 199 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
SNHG1-216ENST00000541416 RAB3DO95716 219 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 NUDT3O95989 172 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 CFDP00746 253 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-216ENST00000541416 INSP01308 110 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 GPX4P36969 197 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-216ENST00000541416 GALR1P47211 349 aa8.64□□□□□ -1.03
SNHG1-216ENST00000541416 LYZP61626 148 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms