RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CAV2P51636 162 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 YPEL3P61236 119 aaPredicted RBP5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 DLK1P80370 383 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 ARL16Q0P5N6 197 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 FCN2Q15485 313 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 CD300EQ496F6 205 aaPredicted RBP5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 LRRC37A5PQ49AS3 106 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 BTNL8Q6UX41 500 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 OR2K2Q8NGT1 345 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 DYNLRB2Q8TF09 96 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 PPP1R1CQ8WVI7 109 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 MARC2Q969Z3 335 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 GINS3Q9BRX5 216 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 MED28Q9H204 178 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 TECRQ9NZ01 308 aaKnown RBP5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 OR5AC2Q9NZP5 309 aa5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 MRPL27Q9P0M9 148 aaKnown RBP5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 ZMAT5Q9UDW3 170 aaKnown RBP5.27□□□□□ -1.57
LPCAT3-209ENST00000540060 IGHV7-4-1A0A0J9YVY3 117 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM238LA0A1B0GVL6 79 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 WI2-2373I1.2A0A1W2PRP0 233 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 FAM24AA6NFZ4 105 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 ZFP92A6NM28 416 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 E5RGE8 158 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 K7EIL1 84 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 MPC2O95563 127 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 IL4P05112 153 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 PET100P0DJ07 73 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 PSG1P11464 419 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 GP9P14770 177 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 SULT1A1P50225 295 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 BCAP31P51572 246 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 RRAS2P62070 204 aaPredicted RBP5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 ZNF90Q03938 601 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 AKR1C1Q04828 323 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TNP2Q05952 138 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 SLC38A11Q08AI6 406 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 USF2Q15853 346 aaPredicted RBP5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 DEFB114Q30KQ6 69 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 LCN12Q6JVE5 192 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM144Q7Z5S9 345 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM61Q8N0U2 210 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM252Q8N6L7 170 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 OR10P1Q8NGE3 313 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 PRR25Q96S07 402 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TRGV9Q99603 122 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 GGACTQ9BVM4 153 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 SMPXQ9UHP9 88 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 SELENOKQ9Y6D0 94 aa5.26□□□□□ -1.57
LPCAT3-209ENST00000540060 TENM3Q9P273 2699 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 IGHV3-49A0A0A0MS15 119 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 TRAV14DV4A0A0A6YYC5 116 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 SMCO3A2RU48 225 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 CHEK1O14757 476 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 CST7O76096 145 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 APOHP02749 345 aaPredicted RBP5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RLN2P04090 185 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 GIPP09681 153 aaPredicted RBP5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RD3LP0DJH9 198 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 LYL1P12980 280 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 ATF4P18848 351 aaPredicted RBP5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 CRYBB3P26998 211 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 P2RY1P47900 373 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 EWSR1Q01844 656 aaKnown RBP eCLIP5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 VWC2Q2TAL6 325 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 STX12Q86Y82 276 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM217Q8N7C4 229 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 OR51G1Q8NGK1 321 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 Q8WTZ3 238 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 ASB13Q8WXK3 278 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 ST8SIA2Q92186 375 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RNF2Q99496 336 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RNF126Q9BV68 326 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 RHPN1-AS1Q9BWJ2 59 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 VSIRQ9H7M9 311 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 NPVFQ9HCQ7 196 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 MBD2Q9UBB5 411 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 LSM4Q9Y4Z0 139 aaKnown RBP5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 SORL1Q92673 2214 aa5.25□□□□□ -1.57
LPCAT3-209ENST00000540060 IGHV3OR16-13A0A075B7E8 117 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 IGHV3-74A0A0B4J1X5 117 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 TRAV25A0A0B4J276 109 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 ZNF785A8K8V0 405 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 TSPAN4O14817 238 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 FABP1P07148 127 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 HNRNPCP07910 306 aaKnown RBP eCLIP5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 NPPCP23582 126 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 S100A11P31949 105 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 HBG1P69891 147 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 HBG2P69892 147 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 NHLH2Q02577 135 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 BAXQ07812 192 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 OR2F1Q13607 317 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 TEPPQ6URK8 271 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 TMEM182Q6ZP80 229 aaPredicted RBP5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 LILRB2Q8N423 598 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 MRAPQ8TCY5 172 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 METTL26Q96S19 204 aa5.24□□□□□ -1.57
LPCAT3-209ENST00000540060 MGST2Q99735 147 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms