RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 CECR9P0C854 216 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 CGB3P0DN86 165 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 ANXA2RQ3ZCQ2 193 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 WFDC6Q9BQY6 131 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 TMEM8BA6NDV4 472 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 SCN10AQ9Y5Y9 1956 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 VDAC2P45880 294 aaPredicted RBP10.73□□□□□ -0.69
CACNB4-210ENST00000539935 CCL20P78556 96 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 MESP2Q0VG99 397 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 OR13A1Q8NGR1 328 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 TNS1Q9HBL0 1735 aaKnown RBP10.73□□□□□ -0.69
CACNB4-210ENST00000539935 NBR2O15453 112 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
CACNB4-210ENST00000539935 LOC102723996A0A087X1L8 192 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 IFITM2Q01629 132 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 LAGE3Q14657 143 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 TMEM144Q7Z5S9 345 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 DSCR8Q96T75 97 aa10.73□□□□□ -0.69
CACNB4-210ENST00000539935 F2Z2F3 143 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 LINC01549A6NIU2 74 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 COL4A1P02462 1669 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 CLPSP04118 112 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 RASL10AQ92737 203 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 SELENOKQ9Y6D0 94 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 SMIM10L1P0DMW3 83 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 SMIM10Q96HG1 83 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 USF3Q68DE3 2245 aa10.72□□□□□ -0.69
CACNB4-210ENST00000539935 CD5P06127 495 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 ERCC8Q13216 396 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 MDS2Q8NDY4 140 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 C1QL2Q7Z5L3 287 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 GNB1LQ9BYB4 327 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 TNCP24821 2201 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 RPL23P62829 140 aaKnown RBP10.71□□□□□ -0.69
CACNB4-210ENST00000539935 CHCHD1Q96BP2 118 aaKnown RBP10.71□□□□□ -0.69
CACNB4-210ENST00000539935 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
CACNB4-210ENST00000539935 SPRED2Q7Z698 418 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 TRAV14DV4A0A0A6YYC5 116 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 LOC101059948A0A1B0GTJ6 334 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 C9JAW5 83 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 ZNF124Q15973 351 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 LINC01559Q495D7 138 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 NKAPP1Q8N9T2 125 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 RNF125Q96EQ8 232 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 TEX43Q6ZNM6 134 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 FAM181AQ8N9Y4 354 aa10.71□□□□□ -0.7
CACNB4-210ENST00000539935 NAA38Q9BRA0 125 aaKnown RBP10.71□□□□□ -0.7
CACNB4-210ENST00000539935 NYNRINQ9P2P1 1898 aaKnown RBP10.71□□□□□ -0.7
CACNB4-210ENST00000539935 IGHV3-11P01762 117 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 C1QTNF9P0C862 333 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 FOXL1Q12952 345 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 NSUN5P1Q3KNT7 163 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 SP7Q8TDD2 431 aaPredicted RBP10.7□□□□□ -0.7
CACNB4-210ENST00000539935 TMEM170AQ8WVE7 144 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 RAMP1O60894 148 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 C1QTNF5Q9BXJ0 243 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 IGHV2OR16-5A0A0B4J2B6 119 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 FAM90A9PA6NNJ1 464 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 MLNRO43193 412 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 COLCA1Q6ZS62 124 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 RTBDNQ9BSG5 229 aaPredicted RBP10.7□□□□□ -0.7
CACNB4-210ENST00000539935 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 FCN3O75636 299 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 ATP1A1-AS1Q5TC04 95 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 FAM216BQ8N7L0 139 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 IFI27L1Q96BM0 104 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
CACNB4-210ENST00000539935 LCTP09848 1927 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 TCRBV4S1A1TA0A5B7 111 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 PRB1P04280 392 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 NEUROG3Q9Y4Z2 214 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 SBF1O95248 1867 aa10.7□□□□□ -0.7
CACNB4-210ENST00000539935 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
CACNB4-210ENST00000539935 NPIPB5A8MRT5 1133 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 A0A0G2JK05 382 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 GATA2P23769 480 aaPredicted RBP10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SEC61GP60059 68 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 FAM27E3Q08E93 113 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 WFDC12Q8WWY7 111 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 BRCA1P38398 1863 aaKnown RBP10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SS18Q15532 418 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SPSB2Q99619 263 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 OSTCQ9NRP0 149 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 GNG5P63218 68 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 ZNF525Q8N782 197 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SAA2-SAA4A0A096LPE2 208 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 YPEL1O60688 119 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SAA2P0DJI9 122 aaPredicted RBP10.69□□□□□ -0.7
CACNB4-210ENST00000539935 PPIFP30405 207 aaKnown RBP10.69□□□□□ -0.7
CACNB4-210ENST00000539935 BCL6BQ8N143 479 aaPredicted RBP10.69□□□□□ -0.7
CACNB4-210ENST00000539935 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 PRSS22Q9GZN4 317 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 A6NNC1 897 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 SRD5A1P18405 259 aa10.69□□□□□ -0.7
CACNB4-210ENST00000539935 CHCHD2Q9Y6H1 151 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms