RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GGTLC1Q9BX51 225 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 PGPEP1LA6NFU8 196 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 ADARB2-AS1A8MUL3 147 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 C3orf36Q3SXR2 165 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 INTS1Q8N201 2190 aaKnown RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 SLC25A2Q9BXI2 301 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 SLC25A39Q9BZJ4 359 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF415Q09FC8 603 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 OCC1Q8TAD7 63 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 NRN1Q9NPD7 142 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV1-3A0A0C4DH29 117 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 FGF16O43320 207 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 GFI1Q99684 422 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 LINC00587B1AMM8 73 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MDS2Q8NDY4 140 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 LINC00477Q96M19 166 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MUC21A0A0G2JKD1 596 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MUC21A0A140T8X8 626 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 C5orf30Q96GV9 206 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 PRDM13Q9H4Q3 707 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 DENND4CQ5VZ89 1909 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 A0A0G2JNJ9 132 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MBD3L4A6NDZ8 208 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MBD3L3A6NE82 208 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MBD3L5A6NJ08 208 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 LILRA1O75019 489 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 HTN3P15516 51 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
LSAMP-207ENST00000539563 SPOCK3Q9BQ16 436 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 Q9UFV3 132 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 APC2O95996 2303 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 A0A1B0GV90 55 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 LDLRAD4O15165 306 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 ERVK11-1P61568 191 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 OR10W1Q8NGF6 305 aa5.35□□□□□ -1.55
LSAMP-207ENST00000539563 TRAV1-1A0A0B4J248 108 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 MLNRO43193 412 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 SERF1AO75920 110 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 IGKCP01834 107 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 PYYP10082 97 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 PLNP26678 52 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 LYPD1Q8N2G4 141 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 ZCCHC24Q8N2G6 241 aaKnown RBP5.34□□□□□ -1.55
LSAMP-207ENST00000539563 PNRC2Q9NPJ4 139 aaKnown RBP5.34□□□□□ -1.55
LSAMP-207ENST00000539563 CD24P25063 80 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 ST6GALNAC3Q8NDV1 305 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 MS4A6AQ9H2W1 248 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 IGKV1-12A0A0C4DH73 117 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 PRR32B1ATL7 298 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 LYNX1G3V0Z9 82 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 IGKV1D-12P01611 117 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 LYNX1P0DP58 116 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 LY6DQ14210 128 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 LAGE3Q14657 143 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 SEPSECSQ9HD40 501 aaKnown RBP5.34□□□□□ -1.55
LSAMP-207ENST00000539563 BUB1B-PAK6H3BSN5 160 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 CRPP02741 224 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 C1QTNF9P0C862 333 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 A0A1B0GWB2 263 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 B4DSR2 109 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 Q6ZS49 121 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 OR2K2Q8NGT1 345 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 MGST2Q99735 147 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 SMPXQ9UHP9 88 aa5.34□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV3OR16-8A0A075B7F1 116 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 HOXA3O43365 443 aaPredicted RBP5.34□□□□□ -1.56
LSAMP-207ENST00000539563 CLPSP04118 112 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 KIAA1549LQ6ZVL6 1849 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 NACAE9PAV3 2078 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 A0A1B0GWJ7 208 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 WFDC1Q9HC57 220 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 CENPFP49454 3210 aa5.34□□□□□ -1.56
LSAMP-207ENST00000539563 H0YIZ8 118 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 EVI2AP22794 236 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 Q6P435 159 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TREML4Q6UXN2 200 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM86BQ8N661 226 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 AGMATQ9BSE5 352 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 GSN-AS1Q9NRJ2 163 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 CD28P10747 220 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 ZNF138P52744 262 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 FOXL1Q12952 345 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 C15orf32Q32M92 178 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 IFI27L1Q96BM0 104 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 MED12Q93074 2177 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV9-2A0A087WT02 112 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 PMS2P5A8MQ11 134 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 EFNA2O43921 213 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 PRB3Q04118 309 aaPredicted RBP5.33□□□□□ -1.56
LSAMP-207ENST00000539563 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 OR9G4Q8NGQ1 327 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 H0YJW9 148 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TEX38Q6PEX7 206 aa5.33□□□□□ -1.56
LSAMP-207ENST00000539563 TOMM40O96008 361 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms