RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 hDV102S1A0JD36 115 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 H0Y8G0 127 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 FSTL3O95633 263 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF138P52744 262 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 FAM231DQ6ZW35 169 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 RITA1Q96K30 269 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 PGLYRP4Q96LB8 373 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 PTPRZ1P23471 2315 aaPredicted RBP16.34■□□□□ 0.21
TMEM260-203ENST00000539559 ORAOV1Q8WV07 137 aa16.33■□□□□ 0.21
TMEM260-203ENST00000539559 RAB9BQ9NP90 201 aa16.33■□□□□ 0.21
TMEM260-203ENST00000539559 COX11Q9Y6N1 276 aa16.33■□□□□ 0.21
TMEM260-203ENST00000539559 PRB3Q04118 309 aaPredicted RBP16.33■□□□□ 0.2
TMEM260-203ENST00000539559 SSX8Q7RTT4 187 aa16.33■□□□□ 0.2
TMEM260-203ENST00000539559 GSX1Q9H4S2 264 aaPredicted RBP16.33■□□□□ 0.2
TMEM260-203ENST00000539559 IGHV3-72A0A0B4J1Y9 119 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 TCRBV4S1A1TA0A5B7 111 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 FCN3O75636 299 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 APOA2P02652 100 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 KLF5Q13887 457 aaPredicted RBP16.32■□□□□ 0.2
TMEM260-203ENST00000539559 CACNG8Q8WXS5 425 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 FLYWCH2Q96CP2 140 aaKnown RBP16.32■□□□□ 0.2
TMEM260-203ENST00000539559 MRPS16Q9Y3D3 137 aaKnown RBP16.32■□□□□ 0.2
TMEM260-203ENST00000539559 TACC2O95359 2948 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 CA7P43166 264 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 GTSF1Q8WW33 167 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 ASCL2Q99929 193 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 HIST1H1EP10412 219 aaKnown RBP16.32■□□□□ 0.2
TMEM260-203ENST00000539559 FAM120AOSQ5T036 256 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 ZNF833PQ6ZTB9 187 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 PDPNQ86YL7 162 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 EPDR1Q9UM22 224 aa16.32■□□□□ 0.2
TMEM260-203ENST00000539559 IGLV3-9A0A075B6K5 115 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 OR4C46A6NHA9 309 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 C22orf46C9J442 243 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 ZZEF1O43149 2961 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 SLC25A17O43808 307 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 DLX1P56177 255 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 FAM27E3Q08E93 113 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 OSR1Q8TAX0 266 aaPredicted RBP16.31■□□□□ 0.2
TMEM260-203ENST00000539559 ZNF596Q8TC21 504 aa16.31■□□□□ 0.2
TMEM260-203ENST00000539559 TRAV8-1A0A0A6YYK1 113 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 A0A1B0GXF2 115 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 IGLC7A0M8Q6 106 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 BPIFB3P59826 476 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 RASL11AQ6T310 242 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 ZNF738Q8NE65 137 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 H1FXQ92522 213 aaKnown RBP16.3■□□□□ 0.2
TMEM260-203ENST00000539559 PMCHL2Q9BQD1 86 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 TMEM70Q9BUB7 260 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 hADV38S2A0JD32 116 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 OR2J3O76001 311 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 FAM87AP0C7U9 286 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 GATA4P43694 442 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 UBE2V1Q13404 147 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 MPV17L2Q567V2 206 aa16.3■□□□□ 0.2
TMEM260-203ENST00000539559 PCNX1Q96RV3 2341 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 CSMD1Q96PZ7 3565 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 LOC105371242A0A075B767 164 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 FOXC1Q12948 553 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 NCOR1P1Q9H4R4 102 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 AKAP13Q12802 2813 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 IGHV1-24A0A0C4DH33 117 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 A0A1W2PPI3 338 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 NKX6-3A6NJ46 265 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 MYCNOSP40205 109 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 HBBP68871 147 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 TMEM177Q53S58 311 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 TIMM23BQ5SRD1 257 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 OR10X1Q8NGY0 326 aa16.29■□□□□ 0.2
TMEM260-203ENST00000539559 MBD3L4A6NDZ8 208 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 MBD3L3A6NE82 208 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 MBD3L5A6NJ08 208 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 K7EM74 188 aa16.28■□□□□ 0.2
TMEM260-203ENST00000539559 OR5AN1Q8NGI8 311 aa16.28■□□□□ 0.2
TMEM260-203ENST00000539559 MBD3L2Q8NHZ7 208 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 CEACAM8P31997 349 aaPredicted RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 MUC15Q8N387 334 aa16.28■□□□□ 0.2
TMEM260-203ENST00000539559 RPP21Q9H633 154 aaKnown RBP16.28■□□□□ 0.2
TMEM260-203ENST00000539559 RBX1P62877 108 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 TMEM200BQ69YZ2 307 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 LINC00574Q9H8X3 128 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 SSUH2Q9Y2M2 353 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 ZNF835Q9Y2P0 537 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 LINC00312Q9Y6C7 94 aa16.27■□□□□ 0.2
TMEM260-203ENST00000539559 ENSAO43768 121 aaKnown RBP16.27■□□□□ 0.19
TMEM260-203ENST00000539559 CSN3P07498 182 aa16.27■□□□□ 0.19
TMEM260-203ENST00000539559 NBEAP1P0C6P0 100 aa16.27■□□□□ 0.19
TMEM260-203ENST00000539559 ATP5IP56385 69 aaPredicted RBP16.27■□□□□ 0.19
TMEM260-203ENST00000539559 GPR82Q96P67 336 aa16.27■□□□□ 0.19
TMEM260-203ENST00000539559 IGHV1-69-2A0A0G2JMI3 117 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 FAM215AQ9Y5M1 114 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 TOMM40O96008 361 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 IGLV2-23P01705 113 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 FBLN7Q53RD9 439 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 CIARTQ8N365 385 aaPredicted RBP16.26■□□□□ 0.19
TMEM260-203ENST00000539559 FAM169BQ8N8A8 192 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 OR4C13Q8NGP0 309 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 TMEM167AQ8TBQ9 72 aa16.26■□□□□ 0.19
TMEM260-203ENST00000539559 WASHC3Q9Y3C0 194 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms