RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SMIM20Q8N5G0 67 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM75Q8N9X5 138 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 CCL4L1Q8NHW4 92 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 FAM172AQ8WUF8 416 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 BORCS7Q96B45 105 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 TXNL4BQ9NX01 149 aaKnown RBP0.53□□□□□ -2.33
HIF1A-204ENST00000539097 PRO2289Q9P1D8 64 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 SS18L2Q9UHA2 77 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 ERG28Q9UKR5 140 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 PRNDQ9UKY0 176 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 COQ4Q9Y3A0 265 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 ABCC1P33527 1531 aa0.53□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF532Q9HCE3 1301 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OTOGLQ3ZCN5 2332 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 LY75O60449 1722 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 XRN1Q8IZH2 1706 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TRAV8-3A0A0A6YYJ7 113 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 FAM236DA0A1B0GTK5 79 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PSMD12O00232 456 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PSMG1O95456 288 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CRYZL1O95825 349 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR10J4P0C629 311 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 FAM236CP0DP71 79 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RNASE4P34096 147 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RANBP1P43487 201 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SULT1A1P50225 295 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SULT1A2P50226 295 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CTBP2P56545 445 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RAB25P57735 213 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TBPL1P62380 186 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 FABP5Q01469 135 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SLC38A11Q08AI6 406 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 HES1Q14469 280 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 FAM229BQ4G0N7 80 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 KLHL12Q53G59 568 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TIFABQ6ZNK6 161 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ATP6V1C2Q8NEY4 427 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR5J2Q8NH18 312 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR4A5Q8NH83 315 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PPTC7Q8NI37 304 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IMP4Q96G21 291 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SFRP2Q96HF1 295 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CCDC115Q96NT0 180 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 GPR82Q96P67 336 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DOHHQ9BU89 302 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TIPINQ9BVW5 301 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 VCXQ9H320 206 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PARVAQ9NVD7 372 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PRELID3BQ9Y3B1 194 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 BPTFQ12830 3046 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ATP7BP35670 1465 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ANKRD36A6QL64 1941 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 MRPS14O60783 128 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CPSF4O95639 269 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV1D-33P01593 117 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV1-33P01594 117 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV3-11P04433 115 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TYMSP04818 313 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 FAM228BP0C875 321 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 RNASE2P10153 161 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SERPINB10P48595 397 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 BTG2P78543 158 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PRDX1Q06830 199 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PMAIP1Q13794 54 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PDGFRLQ15198 375 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SURF2Q15527 256 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TRIP13Q15645 432 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 HENMT1Q5T8I9 393 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DAZ4Q86SG3 579 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OOSP2Q86WS3 158 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DHFR2Q86XF0 187 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SLC22A24Q8N4F4 322 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PLPP5Q8NEB5 264 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR4D11Q8NGI4 311 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CLDND2Q8NHS1 167 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DCANP1Q8TF63 244 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 THEM6Q8WUY1 208 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 DAZ1Q9NQZ3 744 aaKnown RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 LAMTOR3Q9UHA4 124 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ZNF443Q9Y2A4 671 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 BRCA2P51587 3418 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
HIF1A-204ENST00000539097 CUBNO60494 3623 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 KIAA1549Q9HCM3 1950 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TRANK1O15050 2925 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OVOS2A0A0G2JMS6 1433 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TRIOBPQ9H2D6 2365 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TRAV38-1A0A0B4J264 116 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 TMEM189A5PLL7 270 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR5H14A6NHG9 310 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 M0R378 163 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 LST1O00453 97 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 PLA2G10O15496 165 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 ENTPD6O75354 484 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 NPYP01303 97 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 IGKV1-5P01602 117 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 SCGB1C2P0DMR2 95 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 OR13C7P0DN81 318 aa0.52□□□□□ -2.33
HIF1A-204ENST00000539097 MIFP14174 115 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms