RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RSPO1Q2MKA7 263 aaPredicted RBP14.4□□□□□ -0.1
PHRF1-205ENST00000533464 TRBV24-1A0A075B6N3 115 aa14.4□□□□□ -0.1
PHRF1-205ENST00000533464 SLC50A1Q9BRV3 221 aa14.4□□□□□ -0.1
PHRF1-205ENST00000533464 TMEM242Q9NWH2 141 aa14.4□□□□□ -0.1
PHRF1-205ENST00000533464 PSG1P11464 419 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 DERL1Q9BUN8 251 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 NRN1Q9NPD7 142 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 C15orf62A8K5M9 175 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 EFNA4P52798 201 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 RPRMLQ8N4K4 120 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 LYPD2Q6UXB3 125 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 NEUROG1Q92886 237 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 LY6HO94772 140 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 WNT2P09544 360 aa14.39□□□□□ -0.11
PHRF1-205ENST00000533464 LGALS3P17931 250 aaKnown RBP14.39□□□□□ -0.11
PHRF1-205ENST00000533464 TRAV8-6A0A0B4J262 113 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 K7ERU9 68 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 RNASE4P34096 147 aaKnown RBP14.38□□□□□ -0.11
PHRF1-205ENST00000533464 FAM71F2Q6NXP2 309 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 GLMPQ8WWB7 406 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 OR11H12B2RN74 326 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 KLF17Q5JT82 389 aaPredicted RBP14.38□□□□□ -0.11
PHRF1-205ENST00000533464 TPTE2P1Q5T6R2 138 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 LINC01551Q86U37 167 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 OR11H1Q8NG94 326 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 OR11H2Q8NH07 326 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 PMS2P5A8MQ11 134 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 ASCL2Q99929 193 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 IGKV1-16P04430 117 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 ST6GALNAC6Q969X2 333 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 PRDM13Q9H4Q3 707 aa14.38□□□□□ -0.11
PHRF1-205ENST00000533464 A0A1B0GV90 55 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 ZNF503-AS2A6NEH8 195 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 SNAI2O43623 268 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 VMO1Q7Z5L0 202 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 ITLN2Q8WWU7 325 aaPredicted RBP14.37□□□□□ -0.11
PHRF1-205ENST00000533464 NPFFR1Q9GZQ6 430 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 PF4P02776 101 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 OR4X2Q8NGF9 303 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 PAPPA-AS1Q5QFB9 102 aa14.37□□□□□ -0.11
PHRF1-205ENST00000533464 PLXND1Q9Y4D7 1925 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 NUTF2P61970 127 aaKnown RBP14.36□□□□□ -0.11
PHRF1-205ENST00000533464 GLRX5Q86SX6 157 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 TANC1Q9C0D5 1861 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 COL8A2P25067 703 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 ARL6IP6Q8N6S5 226 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 A0A1B0GWJ7 208 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 C15orf32Q32M92 178 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 SCRT1Q9BWW7 348 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 GEMIN7Q9H840 131 aaKnown RBP14.36□□□□□ -0.11
PHRF1-205ENST00000533464 PPP1R17O96001 155 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 GTF3C1Q12789 2109 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 ANAPC10Q9UM13 185 aa14.36□□□□□ -0.11
PHRF1-205ENST00000533464 UBE2CO00762 179 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 ATP5LO75964 103 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 PPIFP30405 207 aaKnown RBP14.35□□□□□ -0.11
PHRF1-205ENST00000533464 TMEM219Q86XT9 240 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 TSKUQ8WUA8 353 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 LIME1Q9H400 295 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 FAM181BA6NEQ2 426 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 TMEM170BQ5T4T1 132 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 ERASQ7Z444 233 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 PMCHL2Q9BQD1 86 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 GNB1LQ9BYB4 327 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 BUB1B-PAK6H3BSN5 160 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 MLANAQ16655 118 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 PLA2G2CQ5R387 149 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 Q6ZR03 302 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 EXOC3-AS1Q8N2X6 119 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 NUDT10Q8NFP7 164 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 NUDT11Q96G61 164 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 RNF5Q99942 180 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 E7EQL1 145 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
PHRF1-205ENST00000533464 SCGB3A1Q96QR1 104 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 SIGLEC9Q9Y336 463 aa14.35□□□□□ -0.11
PHRF1-205ENST00000533464 COX6CP09669 75 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 LMO1P25800 156 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 FOXC2Q99958 501 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 SLC25A39Q9BZJ4 359 aaPredicted RBP14.34□□□□□ -0.11
PHRF1-205ENST00000533464 IGKV3OR2-268A0A0C4DH90 116 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 H7C1H1 209 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 PAX8Q06710 450 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 GFI1BQ5VTD9 330 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 PRSS22Q9GZN4 317 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 LINC00587B1AMM8 73 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 GNLYP22749 145 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 FBLN7Q53RD9 439 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 DUX3Q96PT4 197 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 HIST1H2BLQ99880 126 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 ZNRD1Q9P1U0 126 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 C5orf64Q2M2E5 130 aa14.34□□□□□ -0.11
PHRF1-205ENST00000533464 TRGV9Q99603 122 aa14.33□□□□□ -0.11
PHRF1-205ENST00000533464 TRAV41A0A0B4J266 112 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 NPIPB5A8MRT5 1133 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 DTX1Q86Y01 620 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 ST6GALNAC3Q8NDV1 305 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 A0A1W2PRX2 142 aa14.33□□□□□ -0.12
PHRF1-205ENST00000533464 RPL15P61313 204 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms