RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CITED2Q99967 270 aaPredicted RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 TRAV9-2A0A087WT02 112 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 H3BVH4 76 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 LOXL3P58215 753 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 COQ2Q96H96 371 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 SRRM5B3KS81 715 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 ADMP35318 185 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 GAGE5Q13069 117 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 GAGE6Q13070 117 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 OSR1Q8TAX0 266 aaPredicted RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 RNF166Q96A37 237 aaPredicted RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 YTHDF2Q9Y5A9 579 aaKnown RBP10.11□□□□□ -0.79
BDNF-218ENST00000533246 OR4C46A6NHA9 309 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 B9A039 149 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
BDNF-218ENST00000533246 YPEL1O60688 119 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 IGKV1D-33P01593 117 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 IGKV1-33P01594 117 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 MGPP08493 103 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 CD300EQ496F6 205 aaPredicted RBP10.1□□□□□ -0.79
BDNF-218ENST00000533246 YPEL2Q96QA6 119 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 LAMA2P24043 3122 aaKnown RBP10.1□□□□□ -0.79
BDNF-218ENST00000533246 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 TRAV5A0A0B4J249 113 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 CA7P43166 264 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 GNG5P63218 68 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 TWIST1Q15672 202 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 TMEM116Q8NCL8 245 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 USP9XQ93008 2570 aaPredicted RBP10.1□□□□□ -0.79
BDNF-218ENST00000533246 SIVA1O15304 175 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 DLX1P56177 255 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 LY6DQ14210 128 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 SPATA31B1PQ5VZV4 182 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 Q6P435 159 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 GRAMD2BQ96HH9 432 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 ZNF257Q9Y2Q1 563 aa10.1□□□□□ -0.79
BDNF-218ENST00000533246 ANKRD11Q6UB99 2663 aaPredicted RBP10.09□□□□□ -0.79
BDNF-218ENST00000533246 NAV2Q8IVL1 2488 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 C5orf42Q9H799 3197 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 TRBV7-9A0A0J9YWB2 115 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 GPR183P32249 361 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 UCNP55089 124 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 MFAP4P55083 255 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 Q6ZWC4 215 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 SPXQ9BT56 116 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 DPM3Q9P2X0 92 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 WDR83OSQ9Y284 106 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 DOPEY1Q5JWR5 2465 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 A0A087X0K7 114 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 MBNL2Q5VZF2 373 aaKnown RBP10.09□□□□□ -0.79
BDNF-218ENST00000533246 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 PLXNB3Q9ULL4 1909 aa10.09□□□□□ -0.79
BDNF-218ENST00000533246 A1L4Q6 167 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 ETV2O00321 342 aaPredicted RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 TYMSP04818 313 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 CACNG8Q8WXS5 425 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 RNASE6Q93091 150 aaKnown RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 MRPL16Q9NX20 251 aaKnown RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 SORL1Q92673 2214 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 KIF26AQ9ULI4 1882 aaPredicted RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 NMUP48645 174 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 ATP5J2P56134 94 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 EFNB3Q15768 340 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 ZFAND6Q6FIF0 208 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 TREML4Q6UXN2 200 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 ST20Q9HBF5 79 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
BDNF-218ENST00000533246 UPK2O00526 184 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 SCGB1A1P11684 91 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 C16orf92Q96LL3 132 aa10.08□□□□□ -0.8
BDNF-218ENST00000533246 A0A0G2JLM5 398 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 IGKV3-15P01624 115 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 MT-ND6P03923 174 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 CKS2P33552 79 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 SPACA3Q8IXA5 215 aa10.07□□□□□ -0.8
BDNF-218ENST00000533246 NEUROG1Q92886 237 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms