RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ACY3Q96HD9 319 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 PBDC1Q9BVG4 233 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 SAV1Q9H4B6 383 aaPredicted RBP8.21□□□□□ -1.1
CMTM1-216ENST00000533078 KLK11Q9UBX7 282 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
CMTM1-216ENST00000533078 HERC1Q15751 4861 aa8.21□□□□□ -1.1
CMTM1-216ENST00000533078 M0QYG6 137 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 TNFAIP8O95379 198 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 APOA1P02647 267 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 FABP1P07148 127 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 TBPP20226 339 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 ALDH3B2P48448 385 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 PSG9Q00887 426 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 ARRDC1Q8N5I2 433 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 OR51G1Q8NGK1 321 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 NPIPB3Q92617 1050 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 PPP1R14BQ96C90 147 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 RNF125Q96EQ8 232 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 CLUHP3Q96NS8 147 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 VCX3AQ9NNX9 186 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 COMMD3Q9UBI1 195 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
CMTM1-216ENST00000533078 UCP1P25874 307 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 RPS19P39019 145 aaKnown RBP8.19□□□□□ -1.1
CMTM1-216ENST00000533078 RORCP51449 518 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 CCL18P55774 89 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 TNP2Q05952 138 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 SP6Q3SY56 376 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 GDF5OSQ5U4N7 250 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 RPRMQ9NS64 109 aa8.19□□□□□ -1.1
CMTM1-216ENST00000533078 C14orf166Q9Y224 244 aaKnown RBP8.19□□□□□ -1.1
CMTM1-216ENST00000533078 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 ZFP92A6NM28 416 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 PSG1P11464 419 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 SCGB2B2Q4G0G5 96 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 ZNF709Q8N972 641 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 RBPMSQ93062 196 aaKnown RBP8.18□□□□□ -1.1
CMTM1-216ENST00000533078 SCRT2Q9NQ03 307 aa8.18□□□□□ -1.1
CMTM1-216ENST00000533078 TEX13DA0A0J9YY54 714 aaPredicted RBP8.17□□□□□ -1.1
CMTM1-216ENST00000533078 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 FAM25AB3EWG3 89 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 FAM25CB3EWG5 89 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 FAM25GB3EWG6 89 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 GABARAPH6UMI1 98 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 ISLRO14498 428 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 GABARAPO95166 117 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 NUDT3O95989 172 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 MEOX2P50222 304 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 B2MP61769 119 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 LSM3P62310 102 aaKnown RBP8.17□□□□□ -1.1
CMTM1-216ENST00000533078 SUPT4H1P63272 117 aaKnown RBP8.17□□□□□ -1.1
CMTM1-216ENST00000533078 KLF9Q13886 244 aaPredicted RBP8.17□□□□□ -1.1
CMTM1-216ENST00000533078 CLINT1Q14677 625 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 ZNF79Q15937 498 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 C1orf194Q5T5A4 169 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 FAM78BQ5VT40 261 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 LHFPL1Q86WI0 220 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 Q8N1X5 172 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 TERB2Q8NHR7 220 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 ABHD1Q96SE0 405 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 TMEM222Q9H0R3 208 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 CACNG5Q9UF02 275 aa8.17□□□□□ -1.1
CMTM1-216ENST00000533078 A0A0G2JRQ6 117 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 F5H768 121 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 CDS2O95674 445 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 INSP01308 110 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 CD3DP04234 171 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 S100A7P31151 101 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 TGFBR1P36897 503 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 PAX9P55771 341 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 RNASE12Q5GAN4 147 aaKnown RBP8.16□□□□□ -1.1
CMTM1-216ENST00000533078 MZT2AQ6P582 158 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 OR4C16Q8NGL9 310 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 OR13C8Q8NGS7 320 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 C15orf40Q8WUR7 153 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 WDR12Q9GZL7 423 aaKnown RBP8.16□□□□□ -1.1
CMTM1-216ENST00000533078 DOK5Q9P104 306 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 U3KQ87 197 aa8.16□□□□□ -1.1
CMTM1-216ENST00000533078 A0A0J9YX75 114 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 SNRPGP15A8MWD9 76 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 OR5AC1P0C628 307 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 SULT1A3P0DMM9 295 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 SULT1A4P0DMN0 295 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 GALR1P47211 349 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 TAS2R19P59542 299 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 DEFB1P60022 68 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 LYZP61626 148 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 TMEM268Q5VZI3 342 aa8.15□□□□□ -1.1
CMTM1-216ENST00000533078 C1orf158Q8N1D5 194 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms