RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PLSCR4Q9NRQ2 329 aa12.04□□□□□ -0.48
NXF1-213ENST00000532297 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
NXF1-213ENST00000532297 IGHV3-48P01763 117 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 IGKV1-16P04430 117 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 CR1LQ2VPA4 569 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 SGK494Q96LW2 274 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 MAP1LC3CQ9BXW4 147 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 MRPL32Q9BYC8 188 aaKnown RBP12.03□□□□□ -0.48
NXF1-213ENST00000532297 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 SLC25A15Q9Y619 301 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 C7orf71A4D174 169 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 IGLC1P0CG04 106 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 GPR183P32249 361 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 CCL13Q99616 98 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 TIMM8BQ9Y5J9 83 aaPredicted RBP12.03□□□□□ -0.48
NXF1-213ENST00000532297 LRBAP50851 2863 aa12.03□□□□□ -0.48
NXF1-213ENST00000532297 DCHS2Q6V1P9 2916 aa12.02□□□□□ -0.48
NXF1-213ENST00000532297 HLA-DRB1P01911 266 aa12.02□□□□□ -0.48
NXF1-213ENST00000532297 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.48
NXF1-213ENST00000532297 DYSFO75923 2080 aa12.02□□□□□ -0.49
NXF1-213ENST00000532297 GAGE10A6NGK3 116 aa12.02□□□□□ -0.49
NXF1-213ENST00000532297 GNG5P63218 68 aa12.02□□□□□ -0.49
NXF1-213ENST00000532297 K7EM74 188 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 SNAI2O43623 268 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 ZNF138P52744 262 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 LHFPL4Q7Z7J7 247 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 PAXXQ9BUH6 204 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 MS4A6AQ9H2W1 248 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 SRRM4A7MD48 611 aaKnown RBP12.01□□□□□ -0.49
NXF1-213ENST00000532297 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 APOA2P02652 100 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 LIPFP07098 398 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 CFHR2P36980 270 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 ZNF137PP52743 207 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 PRCDQ00LT1 54 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 OR10W1Q8NGF6 305 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 C7orf69Q9H7B7 122 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 PRNDQ9UKY0 176 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 RPH3ALQ9UNE2 315 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 SVEP1Q4LDE5 3571 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 TRAV17A0A0B4J275 112 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 FOXE3Q13461 319 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 PET117Q6UWS5 81 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 PGLYRP4Q96LB8 373 aa12.01□□□□□ -0.49
NXF1-213ENST00000532297 ZGRF1Q86YA3 2104 aa12□□□□□ -0.49
NXF1-213ENST00000532297 FAM231BA6NCW3 169 aa12□□□□□ -0.49
NXF1-213ENST00000532297 FTH1P19P0C7X4 201 aa12□□□□□ -0.49
NXF1-213ENST00000532297 TMEM11P17152 192 aa12□□□□□ -0.49
NXF1-213ENST00000532297 PRB3Q04118 309 aaPredicted RBP12□□□□□ -0.49
NXF1-213ENST00000532297 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
NXF1-213ENST00000532297 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
NXF1-213ENST00000532297 FNDC4Q9H6D8 234 aaPredicted RBP12□□□□□ -0.49
NXF1-213ENST00000532297 PSMB11A5LHX3 300 aa12□□□□□ -0.49
NXF1-213ENST00000532297 COX7A2P2O60397 106 aa12□□□□□ -0.49
NXF1-213ENST00000532297 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 OR5AL1P0C617 328 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 HTR1DP28221 377 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 ARF6P62330 175 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
NXF1-213ENST00000532297 CD69Q07108 199 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 FAM27E3Q08E93 113 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 C2orf83Q53S99 150 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 BPIFA4PQ86YQ2 179 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 H1FXQ92522 213 aaKnown RBP11.99□□□□□ -0.49
NXF1-213ENST00000532297 RPP21Q9H633 154 aaKnown RBP11.99□□□□□ -0.49
NXF1-213ENST00000532297 CGB3P0DN86 165 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 CGB7P0DN87 165 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 UQCRFS1P47985 274 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 OR1B1Q8NGR6 318 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 RAB9BQ9NP90 201 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
NXF1-213ENST00000532297 TEX50A0A1B0GTY4 177 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 CCL8P80075 99 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 LINC00322Q6ZN03 302 aaPredicted RBP11.98□□□□□ -0.49
NXF1-213ENST00000532297 AP1S3Q96PC3 154 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 HSPB8Q9UJY1 196 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 FAM215AQ9Y5M1 114 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 PTPRZ1P23471 2315 aaPredicted RBP11.98□□□□□ -0.49
NXF1-213ENST00000532297 A8MWL6 223 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 UPK2O00526 184 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 LHBP01229 141 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 RNASE2P10153 161 aaKnown RBP11.98□□□□□ -0.49
NXF1-213ENST00000532297 COX8AP10176 69 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 DLX1P56177 255 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 GTF2H5Q6ZYL4 71 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 WFDC8Q8IUA0 241 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.98□□□□□ -0.49
NXF1-213ENST00000532297 ACACAQ13085 2346 aa11.98□□□□□ -0.49
NXF1-213ENST00000532297 ABCA1O95477 2261 aa11.97□□□□□ -0.49
NXF1-213ENST00000532297 E7EUB6 86 aa11.97□□□□□ -0.49
NXF1-213ENST00000532297 CHEK1O14757 476 aa11.97□□□□□ -0.49
NXF1-213ENST00000532297 PLAUP00749 431 aa11.97□□□□□ -0.49
NXF1-213ENST00000532297 SLC25A5P05141 298 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms