RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CFDP00746 253 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 HRASP01112 189 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 TRBV12-3P01733 135 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 RBMY1DP0C7P1 496 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 RBMY1A1P0DJD3 496 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 IGKV1-13P0DP09 117 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 CRYGAP11844 174 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 CD70P32970 193 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 ZNF83P51522 516 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 FOXA3P55318 350 aaPredicted RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 ERCC8Q13216 396 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 Q56UQ5 140 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 MRPL2Q5T653 305 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SLC25A34Q6PIV7 304 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 UNQ5815/PRO19632Q6UWF5 114 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 HEPN1Q6WQI6 88 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 H2AFVQ71UI9 128 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00305Q7Z4B0 112 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SAXO1Q8IYX7 474 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SLC22A24Q8N4F4 322 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 C3orf22Q8N5N4 141 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 DRAM1Q8N682 238 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 OTOSQ8NHW6 89 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 MAL2Q969L2 176 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 TOMM6Q96B49 74 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 NEURL3Q96EH8 262 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 SPACA5Q96QH8 159 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 NAA38Q9BRA0 125 aaKnown RBP2.3□□□□□ -2.04
PTPRK-220ENST00000531466 KRTAP4-1Q9BYQ7 146 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 OTORQ9NRC9 128 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 XCL2Q9UBD3 114 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 CLCF1Q9UBD9 225 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 OR5V1Q9UGF6 321 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 LINC00312Q9Y6C7 94 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 CFTRP13569 1480 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 NCOA2Q15596 1464 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 PXDNQ92626 1479 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 CUX1P39880 1505 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 ZMYM4Q5VZL5 1548 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 TOPBP1Q92547 1522 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 TIAM1Q13009 1591 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 DIP2AQ14689 1571 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 FRMPD1Q5SYB0 1578 aa2.3□□□□□ -2.04
PTPRK-220ENST00000531466 LRRK1Q38SD2 2015 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RIMBP3CA6NJZ7 1639 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RIMBP3BA6NNM3 1639 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 DNMT1P26358 1616 aaKnown RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RIMBP3Q9UFD9 1639 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PLXNC1O60486 1568 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PRXQ9BXM0 1461 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 ANKRD50Q9ULJ7 1429 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 TRBV20OR9-2A0A075B6H5 130 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 IGLV8-61A0A075B6I0 122 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 TRAV13-1A0A0B4J241 112 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 A0A0J9YXV3 536 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 FAM236AA0A1B0GUQ0 79 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 FAM236BA0A1B0GV22 79 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 LRCOL1A6NCL2 159 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 M0R2P5 195 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 FFAR1O14842 300 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 TAX1BP3O14907 124 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 SLC37A4O43826 429 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BKO60814 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PGLYRP1O75594 196 aaPredicted RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 SFT2D2O95562 160 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RBP4P02753 201 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BJP06899 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 FABP2P12104 132 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 SLC25A4P12235 298 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 NMUP48645 174 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PSMB3P49720 205 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 NDUFA8P51970 172 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 NCBP2P52298 156 aaKnown RBP eCLIP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 TAS2R19P59542 299 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 GABARAPL2P60520 117 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 LSM3P62310 102 aaKnown RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 RPS21P63220 83 aaKnown RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 PRR3P79522 188 aaKnown RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 ADIGQ0VDE8 80 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 CLLU1OSQ5K130 101 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
PTPRK-220ENST00000531466 TMEM236Q5W0B7 351 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 OR2T2Q6IF00 324 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 DNAJC24Q6P3W2 148 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 C10orf111Q8N326 155 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 ZIC4Q8N9L1 334 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 C11orf72Q8NBR9 251 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 APCDD1LQ8NCL9 501 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 OR10P1Q8NGE3 313 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 OR4A5Q8NH83 315 aa2.29□□□□□ -2.04
PTPRK-220ENST00000531466 OR9G1Q8NH87 305 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms