RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IGHV1OR15-9A0A0B4J2B8 117 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CSN1S1P47710 185 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CT45A1Q5HYN5 189 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 CT45A3Q8NHU0 189 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 SLC25A33Q9BSK2 321 aa11.46□□□□□ -0.57
PCF11-204ENST00000530660 SIVA1O15304 175 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 PROP1O75360 226 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 VEGFBP49765 207 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 XGP55808 180 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 FHL3Q13643 280 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 DPF1Q92782 380 aa11.46□□□□□ -0.58
PCF11-204ENST00000530660 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.58
PCF11-204ENST00000530660 C8orf88P0DMB2 117 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 CD27P26842 260 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 GPR12P47775 334 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 ANXA2RQ3ZCQ2 193 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 SMIM20Q8N5G0 67 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
PCF11-204ENST00000530660 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 ARFGEF3Q5TH69 2177 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 A0A096LNJ9 63 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 ZNF503-AS2A6NEH8 195 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
PCF11-204ENST00000530660 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 GPR82Q96P67 336 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 ANAPC13Q9BS18 74 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 GLMPQ8WWB7 406 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 CYSLTR1Q9Y271 337 aa11.45□□□□□ -0.58
PCF11-204ENST00000530660 TNFRSF13BO14836 293 aaPredicted RBP11.44□□□□□ -0.58
PCF11-204ENST00000530660 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 TCRBV4S1A1TA0A5B7 111 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 E9PLD3 99 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 TMEM140Q9NV12 185 aa11.44□□□□□ -0.58
PCF11-204ENST00000530660 URB1O60287 2271 aaKnown RBP11.44□□□□□ -0.58
PCF11-204ENST00000530660 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 IGLL5B9A064 214 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 APOMO95445 188 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 SP1P08047 785 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
PCF11-204ENST00000530660 FOXG1P55316 489 aaPredicted RBP11.43□□□□□ -0.58
PCF11-204ENST00000530660 GAGE5Q13069 117 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 GAGE6Q13070 117 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 NPIPB6E9PJ23 425 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 LAMTOR5O43504 91 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 WDR86Q86TI4 376 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 SLC25A45Q8N413 288 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 WDR31Q8NA23 367 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 PRO0461Q9UI25 63 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 RALYQ9UKM9 306 aaKnown RBP11.43□□□□□ -0.58
PCF11-204ENST00000530660 P01737 135 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 OR1C1Q15619 314 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 TMEM164Q5U3C3 297 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 Q6ZUT4 128 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 DCTN5Q9BTE1 182 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 PCSK5Q92824 1860 aa11.43□□□□□ -0.58
PCF11-204ENST00000530660 CRYGCP07315 174 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 CFHR2P36980 270 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 RBPMS2Q6ZRY4 209 aaKnown RBP11.42□□□□□ -0.58
PCF11-204ENST00000530660 GGNQ86UU5 652 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 SIGLEC8Q9NYZ4 499 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 DKK2Q9UBU2 259 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 FAM90A27PA6NNH2 459 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 J3QT63 122 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 MOSP00540 346 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 CHAC1Q9BUX1 264 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 PLAUP00749 431 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 NXPH1P58417 271 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 B3GALT5-AS1P59052 145 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 ERVK-16P61578 105 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 PCOLCEQ15113 449 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 RPL39P5Q59GN2 51 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 TMEM178AQ8NBL3 297 aa11.42□□□□□ -0.58
PCF11-204ENST00000530660 CYB561P49447 251 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 FOXI1Q12951 378 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 LGALS9CQ6DKI2 356 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 Q71RC1 249 aaPredicted RBP11.41□□□□□ -0.58
PCF11-204ENST00000530660 CEP192Q8TEP8 1941 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 PRRG2O14669 202 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 FAM169BQ8N8A8 192 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 FAM110AQ9BQ89 295 aa11.41□□□□□ -0.58
PCF11-204ENST00000530660 NFE4Q86UQ8 179 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 ZNF414Q96IQ9 312 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 C1QTNF4Q9BXJ3 329 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
PCF11-204ENST00000530660 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms