RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 MPDU1O75352 247 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 SAA1P0DJI8 122 aaPredicted RBP9.35□□□□□ -0.91
USP35-207ENST00000530546 COL8A2P25067 703 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 MPV17L2Q567V2 206 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 Q8N7P7 452 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 MGST2Q99735 147 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 PLEKHA3Q9HB20 300 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 FAM181BA6NEQ2 426 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 UPK2O00526 184 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 LY6HO94772 140 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 APOA2P02652 100 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 STAG3L2P0CL84 134 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 STAG3L3P0CL85 134 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 NTF3P20783 257 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 BVES-AS1Q5T3Y7 98 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 FAM19A2Q8N3H0 131 aa9.35□□□□□ -0.91
USP35-207ENST00000530546 EAF1Q96JC9 268 aaPredicted RBP9.35□□□□□ -0.91
USP35-207ENST00000530546 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 GOSR1O95249 250 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 UBE2G1P62253 170 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 TMEM30BQ3MIR4 351 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 LCN12Q6JVE5 192 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 ZNF833PQ6ZTB9 187 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 RALYQ9UKM9 306 aaKnown RBP9.34□□□□□ -0.91
USP35-207ENST00000530546 PRNDQ9UKY0 176 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 WASHC3Q9Y3C0 194 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 IGHV3-72A0A0B4J1Y9 119 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 TNFRSF13BO14836 293 aaPredicted RBP9.34□□□□□ -0.91
USP35-207ENST00000530546 CD5LO43866 347 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 MOB3BQ86TA1 216 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 LRBAP50851 2863 aa9.34□□□□□ -0.91
USP35-207ENST00000530546 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 ADORA2A-AS1P86434 159 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 GGTLC1Q9BX51 225 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 PEF1Q9UBV8 284 aaKnown RBP9.33□□□□□ -0.92
USP35-207ENST00000530546 APCSP02743 223 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 OPRK1P41145 380 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 LY6DQ14210 128 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 OSTCQ9NRP0 149 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 ENSAO43768 121 aaKnown RBP9.33□□□□□ -0.92
USP35-207ENST00000530546 HSBP1O75506 76 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 MT-CO2P00403 227 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 EFNB3Q15768 340 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 POU2AF1Q16633 256 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 MLANAQ16655 118 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 Q56UQ5 140 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 RASL11AQ6T310 242 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 FLYWCH2Q96CP2 140 aaKnown RBP9.33□□□□□ -0.92
USP35-207ENST00000530546 C1orf159Q96HA4 380 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
USP35-207ENST00000530546 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 NUDT3O95989 172 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 HLA-DRB1P01911 266 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 AREGP15514 252 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 IGFBP2P18065 325 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 PSG9Q00887 426 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 G3V4G9 280 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 PRCDQ00LT1 54 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 PAX2Q02962 417 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 TMEM155Q4W5P6 130 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 Q5PR19 223 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 C10orf55Q5SWW7 151 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 NABP2Q9BQ15 211 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 COMMD5Q9GZQ3 224 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 YTHDF2Q9Y5A9 579 aaKnown RBP9.32□□□□□ -0.92
USP35-207ENST00000530546 ARL2-SNX15V9GYD0 113 aa9.32□□□□□ -0.92
USP35-207ENST00000530546 C2orf70A6NJV1 201 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 M0R2Z0 102 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 IGHV1-8P0DP01 117 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 RIPPLY3P57055 190 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 SLC25A34Q6PIV7 304 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 TEPPQ6URK8 271 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 ERASQ7Z444 233 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 E7EUB6 86 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 CRXO43186 299 aaPredicted RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 ACTL6BO94805 426 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 COX7A1P24310 79 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 DLX6P56179 175 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 KLF5Q13887 457 aaPredicted RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 ZNF672Q499Z4 452 aaPredicted RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 STPG3Q8N7X2 389 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 OR5AN1Q8NGI8 311 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 OR9G1Q8NH87 305 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 OSR1Q8TAX0 266 aaPredicted RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 WIPF2Q8TF74 440 aaPredicted RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 KAAG1Q9UBP8 84 aa9.31□□□□□ -0.92
USP35-207ENST00000530546 SPTBN1Q01082 2364 aaKnown RBP9.31□□□□□ -0.92
USP35-207ENST00000530546 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
USP35-207ENST00000530546 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms