RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 BMI1P35226 326 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 DEFA1P59665 94 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 DEFA3P59666 94 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 ODF3L2Q3SX64 289 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 TRGV9Q99603 122 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 FAM110AQ9BQ89 295 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 U3KQK5 164 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 TENM3Q9P273 2699 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 A0A1W2PS18 150 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 C5orf51A6NDU8 294 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 OR4C46A6NHA9 309 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 K7EPK0 472 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 TSC22D2O75157 780 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 HNRNPCP07910 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 ACOT7LQ6ZUV0 252 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 OR51G1Q8NGK1 321 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 GPN1Q9HCN4 374 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-218ENST00000529566 NBEAL2Q6ZNJ1 2754 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 PRAF2O60831 178 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 P2RY1P47900 373 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 ARL16Q0P5N6 197 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 C16orf54Q6UWD8 224 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 GSG1LQ6UXU4 331 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 STPG3Q8N7X2 389 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 RNF125Q96EQ8 232 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 TMEM231Q9H6L2 316 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 UBQLN2Q9UHD9 624 aa11.98□□□□□ -0.49
TSPAN4-218ENST00000529566 IGKV3-7A0A075B6H7 116 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 BUB3O43684 328 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 TFPI2P48307 235 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 OR8G2PQ6IF36 304 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 TMEM182Q6ZP80 229 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 TMEM144Q7Z5S9 345 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 GLMPQ8WWB7 406 aa11.97□□□□□ -0.49
TSPAN4-218ENST00000529566 DNAH7Q8WXX0 4024 aa11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 TRAV2A0A0B4J234 112 aa11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 DLK1P80370 383 aa11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 OR2F1Q13607 317 aa11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 RABAC1Q9UI14 185 aa11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 LSM5Q9Y4Y9 91 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-218ENST00000529566 FNDC10F2Z333 226 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 SIX6O95475 246 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 FABP1P07148 127 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 EIF2B2P49770 351 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 PAFAH1B2P68402 229 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 RAB32Q13637 225 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 FAM24BQ8N5W8 94 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 GRAMD2BQ96HH9 432 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 RCHY1Q96PM5 261 aa11.95□□□□□ -0.5
TSPAN4-218ENST00000529566 K7EQG2 157 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 GOSR2O14653 212 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 DEDDO75618 318 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 GATA2P23769 480 aaPredicted RBP11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 RRAS2P62070 204 aaPredicted RBP11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 RPL11P62913 178 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 AKR1C1Q04828 323 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 ZNF124Q15973 351 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 OR10P1Q8NGE3 313 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 PBDC1Q9BVG4 233 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 GGACTQ9BVM4 153 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 ZMAT4Q9H898 229 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 MAP6D1Q9H9H5 199 aa11.94□□□□□ -0.5
TSPAN4-218ENST00000529566 HELTA6NFD8 242 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 FAM24AA6NFZ4 105 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 L7N2F9 121 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 CMC4P56277 68 aaPredicted RBP11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 H2BFSP57053 126 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 LYZP61626 148 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 VAMP2P63027 116 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 GGTLC1Q9BX51 225 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 NPVFQ9HCQ7 196 aa11.93□□□□□ -0.5
TSPAN4-218ENST00000529566 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 SMCO3A2RU48 225 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 S100A10P60903 97 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 NMES1Q9C002 83 aa11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
TSPAN4-218ENST00000529566 PTTG1O95997 202 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 CAV2P51636 162 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 AP2S1P53680 142 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 C1orf194Q5T5A4 169 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 SIGLEC15Q6ZMC9 328 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 BPIFCQ8NFQ6 507 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 RETNQ9HD89 108 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 SLC45A2Q9UMX9 530 aa11.91□□□□□ -0.5
TSPAN4-218ENST00000529566 IGSF23A1L1A6 192 aa11.9□□□□□ -0.5
TSPAN4-218ENST00000529566 H0YIZ8 118 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms