RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 DEFB108AA8MXU0 73 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 SBSPONQ8IVN8 264 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 COQ2Q96H96 371 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 TMUB1Q9BVT8 246 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 TMEM14BQ9NUH8 114 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
CSMD1-213ENST00000523488 IGHV3-43A0A0B4J1X8 118 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 IGHV3-43DP0DP04 118 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 PLP2Q04941 152 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 ZADH2Q8N4Q0 377 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 SMRP1Q8NCR6 262 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 RFESDQ8TAC1 157 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 FGFBP3Q8TAT2 258 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 NEU4Q8WWR8 484 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-213ENST00000523488 VGLL1Q99990 258 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 MPC1Q9Y5U8 109 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 A0A096LPE4 126 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 A0A1W2PPZ6 126 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 OR2H2O95918 312 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 OR1C1Q15619 314 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 Q8IYB0 196 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 SGK494Q96LW2 274 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 E9PLD3 99 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 F8W1H4 67 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 SMAD7O15105 426 aaKnown RBP6.8□□□□□ -1.32
CSMD1-213ENST00000523488 C18orf15Q96N68 181 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 DSCAML1Q8TD84 2053 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 TRIOO75962 3097 aa6.8□□□□□ -1.32
CSMD1-213ENST00000523488 A0A0J9YW62 118 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 TMEM30CPA0ZSE6 113 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 C15orf65H3BRN8 121 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 P01737 135 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 IGHV3-7P01780 117 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 CEBPDP49716 269 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-213ENST00000523488 LINC00205P59089 165 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 CFHR1Q03591 330 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 WFDC2Q14508 124 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 LINC00574Q9H8X3 128 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 RAI1Q7Z5J4 1906 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-213ENST00000523488 SLC25A17O43808 307 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 PROP1O75360 226 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 LIFP15018 202 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 COL8A2P25067 703 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 FCGR2BP31994 310 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-213ENST00000523488 CCL11P51671 97 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 HES3Q5TGS1 186 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 VKORC1L1Q8N0U8 176 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF502Q8TBZ5 544 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 JPT1Q9UK76 154 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 CYSLTR1Q9Y271 337 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 USP34Q70CQ2 3546 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 A0A1W2PR77 199 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 MGST3O14880 152 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 FCER1GP30273 86 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 PLGLB1Q02325 96 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 ATP5G2Q06055 141 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 PLXDC1Q8IUK5 500 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 BCL6BQ8N143 479 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-213ENST00000523488 SLC25A2Q9BXI2 301 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 PRRG4Q9BZD6 226 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 NHP2Q9NX24 153 aaKnown RBP6.79□□□□□ -1.32
CSMD1-213ENST00000523488 B4GALT7Q9UBV7 327 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 INSIG2Q9Y5U4 225 aa6.79□□□□□ -1.32
CSMD1-213ENST00000523488 CXCL13O43927 109 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 DSCR4P56555 118 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-213ENST00000523488 TTC9CQ8N5M4 171 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 GNG12Q9UBI6 72 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 BOKQ9UMX3 212 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-213ENST00000523488 TCF19Q9Y242 345 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 SIT1Q9Y3P8 196 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 LTAP01374 205 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 SLC25A5P05141 298 aaKnown RBP6.78□□□□□ -1.32
CSMD1-213ENST00000523488 CLEC3BP05452 202 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 CYB561P49447 251 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 SSBP2P81877 361 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-213ENST00000523488 ACP7Q6ZNF0 438 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 ARPC1AQ92747 370 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 GPR82Q96P67 336 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 SPAG8Q99932 426 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-213ENST00000523488 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 SRXN1Q9BYN0 137 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 J3QT63 122 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 Q6ZR03 302 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 ZNF329Q86UD4 541 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 TRANK1O15050 2925 aa6.78□□□□□ -1.32
CSMD1-213ENST00000523488 C12orf77C9JDV5 145 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 PEX7O00628 323 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 CNIH1O95406 144 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 SRYQ05066 204 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 GAGE13Q4V321 117 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 FAM53AQ6NSI3 398 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-213ENST00000523488 WDR86Q86TI4 376 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 S1PR3Q99500 378 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
CSMD1-213ENST00000523488 TPPP3Q9BW30 176 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms