RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 NXPH4O95158 308 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 BAP18Q8IXM2 172 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 OR11H7Q8NGC8 314 aa9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
NKX3-1-202ENST00000523261 FCER2P06734 321 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 GNAO1P09471 354 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 HSMCR30P0CW71 290 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 OR10J1P30954 320 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 RND2P52198 227 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 IZUMO4Q1ZYL8 232 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 PRSS54Q6PEW0 395 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 Q6ZSA8 131 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 SLC35G3Q8N808 338 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 C20orf173Q96LM9 149 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 RPRMQ9NS64 109 aa9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 FAM212BQ9NTI7 297 aaPredicted RBP9.35□□□□□ -0.91
NKX3-1-202ENST00000523261 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 SCGNO76038 276 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 HSPA13P48723 471 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 CMTM1Q8IZ96 169 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 OR5AP2Q8NGF4 316 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 MRGPRFQ96AM1 343 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 VSIG2Q96IQ7 327 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 ACOT13Q9NPJ3 140 aa9.34□□□□□ -0.91
NKX3-1-202ENST00000523261 TOMM40O96008 361 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 RAB3BP20337 219 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 TAS2R60P59551 318 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 BSXQ3C1V8 233 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 GPR141Q7Z602 305 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 C8orf59Q8N0T1 100 aaPredicted RBP9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 DHRSXQ8N5I4 330 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 RNASE8Q8TDE3 154 aaKnown RBP9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 LINC01587Q99440 93 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
NKX3-1-202ENST00000523261 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 LRCOL1A6NCL2 159 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 GPR31O00270 319 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 RD3LP0DJH9 198 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 PSMB9P28065 219 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 NUP62P37198 522 aaPredicted RBP9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 ASIPP42127 132 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 CNN1P51911 297 aaKnown RBP9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 DHRS11Q6UWP2 260 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 TMEM144Q7Z5S9 345 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 TMED4Q7Z7H5 227 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 TMEM256Q8N2U0 113 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 OR51G1Q8NGK1 321 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 FXYD6Q9H0Q3 95 aa9.32□□□□□ -0.92
NKX3-1-202ENST00000523261 A0A0B4J293 547 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 PTGES3LE9PB15 166 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 ADAP1O75689 374 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 NXPH3O95157 252 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 PSG1P11464 419 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 HTN1P15515 57 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 ETV6P41212 452 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 MLLT11Q13015 90 aaPredicted RBP9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 TBCEQ15813 527 aaPredicted RBP9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 ZNF2Q9BSG1 426 aaPredicted RBP9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 EHFQ9NZC4 300 aa9.31□□□□□ -0.92
NKX3-1-202ENST00000523261 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 SMIM30A4D0T7 59 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 DUSP14O95147 198 aaKnown RBP9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 SLC25A4P12235 298 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 MYL9P24844 172 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 UCP1P25874 307 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 RFX2P48378 723 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 PHLDA2Q53GA4 152 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 OR8G2PQ6IF36 304 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 S100A14Q9HCY8 104 aa9.3□□□□□ -0.92
NKX3-1-202ENST00000523261 TRAV18A0A075B6X5 111 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 GAGE12BA1L429 117 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 BOLA2-SMG1P6H3BVE0 249 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 ATP5HO75947 161 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 GAGE7O76087 117 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 GAGE12FP0CL80 117 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 GAGE12GP0CL81 117 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 GAGE12IP0CL82 117 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 MT1HL1P0DM35 61 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 SUPT4H1P63272 117 aaKnown RBP9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 C1orf194Q5T5A4 169 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 SAMD13Q5VXD3 122 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 SFXN4Q6P4A7 337 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 TBC1D26Q86UD7 250 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 NPIPB3Q92617 1050 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 C16orf92Q96LL3 132 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 SLC25A39Q9BZJ4 359 aaPredicted RBP9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 TNXBP22105 4242 aa9.29□□□□□ -0.92
NKX3-1-202ENST00000523261 IGKV1-5P01602 117 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 Q8N814 137 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 SLC24A4Q8NFF2 622 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 LINC00467Q9BRT7 94 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 TMPRSS5Q9H3S3 457 aa9.28□□□□□ -0.92
NKX3-1-202ENST00000523261 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms