RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TOMM40O96008 361 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 TRBV12-3P01733 135 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 ARL3P36405 182 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 RAB5CP51148 216 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 KHDC1LQ5JSQ8 128 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 SPSB3Q6PJ21 355 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 C11orf44Q8N8P7 122 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 OR10G4Q8NGN3 311 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 OR10G9Q8NGN4 311 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 OR10G7Q8NGN6 311 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 FAM213BQ8TBF2 198 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 Q8WTZ3 238 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 PCNPQ8WW12 178 aaKnown RBP16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 RPRMQ9NS64 109 aa16.52■□□□□ 0.24
R3HCC1-208ENST00000522012 IGHV3-35A0A0C4DH35 117 aa16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 ZNF705EA8MWA4 302 aaPredicted RBP16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 M6PRP20645 277 aa16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 FHITP49789 147 aa16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 DOK5Q9P104 306 aa16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 PEF1Q9UBV8 284 aaKnown RBP16.51■□□□□ 0.23
R3HCC1-208ENST00000522012 CD28P10747 220 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 ORM2P19652 201 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 PROK1P58294 105 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 RAB14P61106 215 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 OR51G1Q8NGK1 321 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 LGALS1P09382 135 aaKnown RBP16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 LYZP61626 148 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 FAM209BQ5JX69 171 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 HIST2H2BDQ6DRA6 164 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 ZNF600Q6ZNG1 722 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 OR1B1Q8NGR6 318 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 PBDC1Q9BVG4 233 aa16.5■□□□□ 0.23
R3HCC1-208ENST00000522012 COX7A2P2O60397 106 aa16.49■□□□□ 0.23
R3HCC1-208ENST00000522012 RELQ04864 619 aaPredicted RBP16.49■□□□□ 0.23
R3HCC1-208ENST00000522012 FAM122CQ6P4D5 195 aa16.49■□□□□ 0.23
R3HCC1-208ENST00000522012 LRRC20Q8TCA0 184 aa16.49■□□□□ 0.23
R3HCC1-208ENST00000522012 PUS1Q9Y606 427 aaKnown RBP eCLIP16.49■□□□□ 0.23
R3HCC1-208ENST00000522012 A0A1B0GUS0 222 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 OR2C1O95371 312 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 IL4P05112 153 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 OR5G3P0C626 314 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 CDX1P47902 265 aaPredicted RBP16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 DPPA3Q6W0C5 159 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 C18orf65Q6ZTR6 163 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 RPP25LQ8N5L8 163 aaKnown RBP16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 OR1L4Q8NGR5 311 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 DNAJC4Q9NNZ3 241 aa16.48■□□□□ 0.23
R3HCC1-208ENST00000522012 BMPR1BO00238 502 aa16.47■□□□□ 0.23
R3HCC1-208ENST00000522012 GGCTO75223 188 aaKnown RBP16.47■□□□□ 0.23
R3HCC1-208ENST00000522012 HYPMO75409 117 aa16.47■□□□□ 0.23
R3HCC1-208ENST00000522012 PRIMA1Q86XR5 153 aa16.47■□□□□ 0.23
R3HCC1-208ENST00000522012 ACTR3CQ9C0K3 210 aaPredicted RBP16.47■□□□□ 0.23
R3HCC1-208ENST00000522012 A0A1W2PPV4 95 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 WI2-2373I1.2A0A1W2PRP0 233 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 FOXL1Q12952 345 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 PXDC1Q5TGL8 231 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 C10orf113Q5VZT2 155 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 TOMM20LQ6UXN7 152 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 PATE2Q6UY27 113 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 TMEM37Q8WXS4 190 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 RNF125Q96EQ8 232 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 SAT2Q96F10 170 aaPredicted RBP16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 PFDN5Q99471 154 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 CITED2Q99967 270 aaPredicted RBP16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 SLC25A22Q9H936 323 aa16.46■□□□□ 0.23
R3HCC1-208ENST00000522012 ELOA3CA0A087WX78 387 aaPredicted RBP16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 NUDT19A8MXV4 375 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 EIF3GO75821 320 aaKnown RBP eCLIP16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 NMBP08949 121 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 PLP1P60201 277 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 BLOC1S1P78537 153 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 ZNF726P1Q15940 193 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 FAM78BQ5VT40 261 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 KLHL30-AS1Q8NEE0 82 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 GATAD1Q8WUU5 269 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 C4orf3Q8WVX3 66 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 RCC1LQ96I51 464 aaKnown RBP16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 ZNF414Q96IQ9 312 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 C19orf24Q9BVV8 132 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 IGHV3OR16-8A0A075B7F1 116 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 A0A1W2PRX2 142 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 I3L521 148 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 CDC34P49427 236 aaPredicted RBP16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 RHOBP62745 196 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 SEPSECSQ9HD40 501 aaKnown RBP16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 HIGD1AQ9Y241 93 aa16.45■□□□□ 0.22
R3HCC1-208ENST00000522012 HMGB3O15347 200 aaKnown RBP16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 HSPB1P04792 205 aaKnown RBP16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 H2AFB1P0C5Y9 115 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 USF2Q15853 346 aaPredicted RBP16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 CLLU1Q5K131 121 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 SPATA31B1PQ5VZV4 182 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 LCN15Q6UWW0 184 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 SSX7Q7RTT5 188 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 SFT2D1Q8WV19 159 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 WFDC12Q8WWY7 111 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 RAB24Q969Q5 203 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 UHRF2Q96PU4 802 aa16.44■□□□□ 0.22
R3HCC1-208ENST00000522012 TSSC4Q9Y5U2 329 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms