RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 FAM231CP0DMU5 169 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 HLA-DRB4P13762 266 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 UCP1P25874 307 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 SNCAP37840 140 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 HOXA1P49639 335 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-210ENST00000521646 MEF2DQ14814 521 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM41BQ5BJD5 291 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 FAAP20Q6NZ36 180 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 C1orf158Q8N1D5 194 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 YTHDF1Q9BYJ9 559 aaKnown RBP7.82□□□□□ -1.16
CSMD1-210ENST00000521646 SLC35B3Q9H1N7 401 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 HLA-DRB4X5D2U9 266 aa7.82□□□□□ -1.16
CSMD1-210ENST00000521646 IGKV1D-37A0A075B6S9 117 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 C3orf85A0A1B0GTC6 90 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 A0A1W2PS18 150 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
CSMD1-210ENST00000521646 PGAM2P15259 253 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 RCVRNP35243 200 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 AKR1C2P52895 323 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 FAM222AQ5U5X8 452 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 OR13C8Q8NGS7 320 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 OR52I2Q8NH67 350 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM230Q96A57 120 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 GPR146Q96CH1 333 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 ABHD1Q96SE0 405 aa7.81□□□□□ -1.16
CSMD1-210ENST00000521646 RTBDNQ9BSG5 229 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-210ENST00000521646 NAA50Q9GZZ1 169 aaKnown RBP7.81□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM127O75204 238 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 IL4P05112 153 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 OR5AC1P0C628 307 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 OR10J1P30954 320 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 VBP1P61758 197 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 KCTD21Q4G0X4 260 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 LPCAT3Q6P1A2 487 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 MARCH1Q8TCQ1 289 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 GLYATL2Q8WU03 294 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 NPIPB3Q92617 1050 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 NEU1Q99519 415 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM231Q9H6L2 316 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 SCPEP1Q9HB40 452 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
CSMD1-210ENST00000521646 IGHV3OR16-12A0A075B7B8 117 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 APOA1P02647 267 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 PSG1P11464 419 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 YPEL3P61236 119 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-210ENST00000521646 C2orf83Q53S99 150 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM88Q6PEY1 159 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 SIGLEC15Q6ZMC9 328 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 SELENOHQ8IZQ5 122 aaKnown RBP7.79□□□□□ -1.16
CSMD1-210ENST00000521646 OR51G1Q8NGK1 321 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 OR1S2Q8NGQ3 325 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 CACNG5Q9UF02 275 aa7.79□□□□□ -1.16
CSMD1-210ENST00000521646 CORTO00230 105 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 CDS2O95674 445 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 TOMM40O96008 361 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 SLPIP03973 132 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 PRB4P10163 310 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-210ENST00000521646 HTN3P15516 51 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 SPCS3P61009 180 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 ZNF90Q03938 601 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 ZNF79Q15937 498 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 TRIM16LQ309B1 348 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 AMTNQ6UX39 209 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 CROCCP3Q8IVE0 287 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 ZNF486Q96H40 463 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-210ENST00000521646 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 SAV1Q9H4B6 383 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-210ENST00000521646 YTHDF2Q9Y5A9 579 aaKnown RBP7.78□□□□□ -1.16
CSMD1-210ENST00000521646 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
CSMD1-210ENST00000521646 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 SPART-AS1P0CW21 52 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 NKX2-1P43699 371 aaPredicted RBP7.77□□□□□ -1.17
CSMD1-210ENST00000521646 NMSQ5H8A3 153 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 ARRDC1Q8N5I2 433 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 SLC24A4Q8NFF2 622 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 OR52E5Q8NH55 327 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 ACY3Q96HD9 319 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 KRTAP1-5Q9BYS1 174 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 MIXL1Q9H2W2 232 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 MTFP1Q9UDX5 166 aa7.77□□□□□ -1.17
CSMD1-210ENST00000521646 IGKV1OR2-108A0A075B7D4 117 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 CRXO43186 299 aaPredicted RBP7.76□□□□□ -1.17
CSMD1-210ENST00000521646 IFNA10P01566 189 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 S100GP29377 79 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 HTR2BP41595 481 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 SUB1P53999 127 aaKnown RBP eCLIP7.76□□□□□ -1.17
CSMD1-210ENST00000521646 RNASE10Q5GAN6 216 aaKnown RBP7.76□□□□□ -1.17
CSMD1-210ENST00000521646 TERB2Q8NHR7 220 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 Q8WTZ3 238 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 LINC00052Q96N35 136 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 NIPSNAP3BQ9BS92 247 aa7.76□□□□□ -1.17
CSMD1-210ENST00000521646 TRAV30A0A087WSZ9 112 aa7.75□□□□□ -1.17
CSMD1-210ENST00000521646 A8MTW9 85 aa7.75□□□□□ -1.17
CSMD1-210ENST00000521646 RD3LP0DJH9 198 aa7.75□□□□□ -1.17
CSMD1-210ENST00000521646 SNRPD3P62318 126 aaKnown RBP7.75□□□□□ -1.17
CSMD1-210ENST00000521646 FCN2Q15485 313 aa7.75□□□□□ -1.17
CSMD1-210ENST00000521646 SCGB2B2Q4G0G5 96 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms