RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 TUBA4BQ9H853 241 aa12.95□□□□□ -0.34
CLK4-204ENST00000520126 CST7O76096 145 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 CD7P09564 240 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 LYZP61626 148 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 WFDC3Q8IUB2 231 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 GBGT1Q8N5D6 347 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 ASCL2Q99929 193 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 TMEM231Q9H6L2 316 aa12.94□□□□□ -0.34
CLK4-204ENST00000520126 LSM4Q9Y4Z0 139 aaKnown RBP12.94□□□□□ -0.34
CLK4-204ENST00000520126 TRAV25A0A0B4J276 109 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 A0A1W2PS18 150 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
CLK4-204ENST00000520126 TCF24Q7RTU0 167 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 TMEM217Q8N7C4 229 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 PPP1R14BQ96C90 147 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 NMES1Q9C002 83 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 RABAC1Q9UI14 185 aa12.93□□□□□ -0.34
CLK4-204ENST00000520126 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 PMS2P5A8MQ11 134 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 DFFBO76075 338 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 HNRNPCP07910 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLK4-204ENST00000520126 USF2Q15853 346 aaPredicted RBP12.92□□□□□ -0.34
CLK4-204ENST00000520126 Q8N1Y9 231 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 GRAMD2BQ96HH9 432 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 TRGV9Q99603 122 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 MED28Q9H204 178 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 DNAH3Q8TD57 4116 aa12.92□□□□□ -0.34
CLK4-204ENST00000520126 DNASE2O00115 360 aaPredicted RBP12.91□□□□□ -0.34
CLK4-204ENST00000520126 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 GATA2P23769 480 aaPredicted RBP12.91□□□□□ -0.34
CLK4-204ENST00000520126 H2BFSP57053 126 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 DLK1P80370 383 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 SLC38A11Q08AI6 406 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 IL15RAQ13261 267 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 STX12Q86Y82 276 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 THAP8Q8NA92 274 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 WFDC10AQ9H1F0 79 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 UBQLN2Q9UHD9 624 aa12.91□□□□□ -0.34
CLK4-204ENST00000520126 IGKV1OR2-108A0A075B7D4 117 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 LCE2BO14633 110 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 TSPAN4O14817 238 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 DEDDO75618 318 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 CRYBB3P26998 211 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 P2RY1P47900 373 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 TMEM144Q7Z5S9 345 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
CLK4-204ENST00000520126 NPVFQ9HCQ7 196 aa12.9□□□□□ -0.34
CLK4-204ENST00000520126 IGSF23A1L1A6 192 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 ORM2P19652 201 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 CYP2G1PQ6ZSU1 146 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 TMEM252Q8N6L7 170 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 STXBP6Q8NFX7 210 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 PPP1R1CQ8WVI7 109 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 LYRM2Q9NU23 88 aaPredicted RBP12.89□□□□□ -0.35
CLK4-204ENST00000520126 OR5AC2Q9NZP5 309 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
CLK4-204ENST00000520126 E5RGE8 158 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 SULT1A1P50225 295 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 FCN2Q15485 313 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 TEPPQ6URK8 271 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 OR1B1Q8NGR6 318 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 B9D2Q9BPU9 175 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 C11orf1Q9H5F2 150 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 DOK5Q9P104 306 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 CD5P06127 495 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 EIF2B2P49770 351 aaKnown RBP12.88□□□□□ -0.35
CLK4-204ENST00000520126 HBG1P69891 147 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 HBG2P69892 147 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
CLK4-204ENST00000520126 SLC25A31Q9H0C2 315 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 SRD5A3Q9H8P0 318 aa12.88□□□□□ -0.35
CLK4-204ENST00000520126 H0YIZ8 118 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 PET100P0DJ07 73 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 CXCL3P19876 107 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 S100A11P31949 105 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 NHLH2Q02577 135 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 TMEM147Q9BVK8 224 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 GGACTQ9BVM4 153 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
CLK4-204ENST00000520126 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 MPC2O95563 127 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 CFDP00746 253 aaPredicted RBP12.86□□□□□ -0.35
CLK4-204ENST00000520126 OR5G3P0C626 314 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 BAXQ07812 192 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 FAM90A2PQ658T7 463 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 SLC25A22Q9H936 323 aa12.86□□□□□ -0.35
CLK4-204ENST00000520126 HELTA6NFD8 242 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms