RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 FBXO5Q9UKT4 447 aa0.94□□□□□ -2.26
NPM1-206ENST00000519955 ZNF106Q9H2Y7 1883 aaKnown RBP0.94□□□□□ -2.26
NPM1-206ENST00000519955 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
NPM1-206ENST00000519955 CDKN2CP42773 168 aa0.93□□□□□ -2.26
NPM1-206ENST00000519955 CLECL1Q8IZS7 167 aa0.93□□□□□ -2.26
NPM1-206ENST00000519955 OR52L1Q8NGH7 329 aa0.93□□□□□ -2.26
NPM1-206ENST00000519955 BORCS5Q969J3 196 aa0.93□□□□□ -2.26
NPM1-206ENST00000519955 TMEM133Q9H2Q1 129 aa0.93□□□□□ -2.26
NPM1-206ENST00000519955 LYRM7Q5U5X0 104 aa0.92□□□□□ -2.26
NPM1-206ENST00000519955 SLAMF6Q96DU3 332 aa0.92□□□□□ -2.26
NPM1-206ENST00000519955 SLC22A13Q9Y226 551 aa0.92□□□□□ -2.26
NPM1-206ENST00000519955 TAF1LQ8IZX4 1826 aa0.92□□□□□ -2.26
NPM1-206ENST00000519955 DENND4CQ5VZ89 1909 aa0.91□□□□□ -2.26
NPM1-206ENST00000519955 CEP192Q8TEP8 1941 aa0.91□□□□□ -2.26
NPM1-206ENST00000519955 EIF5AP63241 154 aaKnown RBP0.91□□□□□ -2.26
NPM1-206ENST00000519955 CCL7P80098 99 aa0.91□□□□□ -2.26
NPM1-206ENST00000519955 PRADC1Q9BSG0 188 aa0.91□□□□□ -2.26
NPM1-206ENST00000519955 ZFYVE9O95405 1425 aa0.9□□□□□ -2.26
NPM1-206ENST00000519955 LAMA4Q16363 1823 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 DHFRP00374 187 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 SRP14P37108 136 aaKnown RBP0.9□□□□□ -2.27
NPM1-206ENST00000519955 MYL6P60660 151 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 DYNLT1P63172 113 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 SPA17Q15506 151 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 FAM74A1Q5RGS3 127 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 SLC30A7Q8NEW0 376 aa0.9□□□□□ -2.27
NPM1-206ENST00000519955 TNRC6AQ8NDV7 1962 aaKnown RBP0.9□□□□□ -2.27
NPM1-206ENST00000519955 CCDC144AA2RUR9 1427 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 TMEM114B3SHH9 223 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 GADD45GO95257 159 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 SRIP30626 198 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 RNASE4P34096 147 aaKnown RBP0.89□□□□□ -2.27
NPM1-206ENST00000519955 Q8N6K4 173 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 TMEM254Q8TBM7 123 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 PATE1Q8WXA2 126 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 BTF3L4Q96K17 158 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 PARVBQ9HBI1 364 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 PLXND1Q9Y4D7 1925 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
NPM1-206ENST00000519955 CCL25O15444 150 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 OR7C1O76099 320 aaPredicted RBP0.88□□□□□ -2.27
NPM1-206ENST00000519955 DEFA3P59666 94 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 GNPDA2Q8TDQ7 276 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 PRAP1Q96NZ9 151 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 GPER1Q99527 375 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 SIGMAR1Q99720 223 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 LINC00467Q9BRT7 94 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 KIFC1Q9BW19 673 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 TLNRD1Q9H1K6 362 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 NMNAT1Q9HAN9 279 aaPredicted RBP0.88□□□□□ -2.27
NPM1-206ENST00000519955 RIMBP3CA6NJZ7 1639 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 RIMBP3BA6NNM3 1639 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 RIMBP3Q9UFD9 1639 aa0.88□□□□□ -2.27
NPM1-206ENST00000519955 TRGV10A0A0A0MS01 117 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 NCR3O14931 201 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 CCL16O15467 120 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 ERP29P30040 261 aaKnown RBP0.87□□□□□ -2.27
NPM1-206ENST00000519955 PIGPP57054 158 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 KRR1Q13601 381 aaKnown RBP0.87□□□□□ -2.27
NPM1-206ENST00000519955 Q8IYB0 196 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 ST6GALNAC3Q8NDV1 305 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 OR2T35Q8NGX2 323 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 YPEL2Q96QA6 119 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 TMEM70Q9BUB7 260 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 CHCHD2Q9Y6H1 151 aaPredicted RBP0.87□□□□□ -2.27
NPM1-206ENST00000519955 FMN1Q68DA7 1419 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 MCM3APO60318 1980 aa0.87□□□□□ -2.27
NPM1-206ENST00000519955 PEAK1Q9H792 1746 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 TRBV6-4A0A1B0GX49 114 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 TCRBV4S1A1TA0A5B7 111 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 TIMM17BO60830 172 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 DNAL4O96015 105 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 PSG9Q00887 426 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 SBSPONQ8IVN8 264 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 OR11H6Q8NGC7 330 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 UCK1Q9HA47 277 aa0.86□□□□□ -2.27
NPM1-206ENST00000519955 ARHGEF28Q8N1W1 1705 aaKnown RBP0.86□□□□□ -2.27
NPM1-206ENST00000519955 TRBV19A0A075B6N1 114 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 TRAV4A0A0B4J268 109 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 RRN3P1Q2M238 152 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 SPRNQ5BIV9 151 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 TNS3Q68CZ2 1445 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 LINC00322Q6ZN03 302 aaPredicted RBP0.85□□□□□ -2.27
NPM1-206ENST00000519955 TMEM126AQ9H061 195 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 TMEM14CQ9P0S9 112 aa0.85□□□□□ -2.27
NPM1-206ENST00000519955 LIN52Q52LA3 116 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 AKIRIN2Q53H80 203 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 C22orf39Q6P5X5 142 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 C2orf82Q6UX34 121 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 MNS1Q8NEH6 495 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 STAG3L4Q8TBR4 150 aa0.84□□□□□ -2.27
NPM1-206ENST00000519955 SCN3AQ9NY46 2000 aa0.84□□□□□ -2.28
NPM1-206ENST00000519955 KDM6AO15550 1401 aaPredicted RBP0.83□□□□□ -2.28
NPM1-206ENST00000519955 A0A1W2PPM0 123 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 A8MWV9 139 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 NUPR1O60356 82 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 GKN2Q86XP6 184 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 PDZD9Q8IXQ8 264 aa0.83□□□□□ -2.28
NPM1-206ENST00000519955 TP53RKQ96S44 253 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms