RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 FAM168AQ92567 244 aa6.68□□□□□ -1.34
HMGB4-203ENST00000519684 ABCA4P78363 2273 aa6.68□□□□□ -1.34
HMGB4-203ENST00000519684 ARHGAP32A7KAX9 2087 aa6.68□□□□□ -1.34
HMGB4-203ENST00000519684 NAV3Q8IVL0 2385 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 J3KRW8 73 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 K7EIM0 57 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 PEX7O00628 323 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 SCGB2A1O75556 95 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 S100A2P29034 98 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 SAA4P35542 130 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 CDX1P47902 265 aaPredicted RBP6.67□□□□□ -1.34
HMGB4-203ENST00000519684 TAS2R60P59551 318 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 RPEL1Q2QD12 228 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 S100A7AQ86SG5 101 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 BLNKQ8WV28 456 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 IL36BQ9NZH7 164 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 THYN1Q9P016 225 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 NCOR2Q9Y618 2525 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 HIVEP3Q5T1R4 2406 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 CHD8Q9HCK8 2581 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 TRAV9-1A0A075B6T8 112 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 TRAV30A0A087WSZ9 112 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 NPFFO15130 113 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 GNG7O60262 68 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 SLC25A5P05141 298 aaKnown RBP6.67□□□□□ -1.34
HMGB4-203ENST00000519684 NBEAP1P0C6P0 100 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 MGST1P10620 155 aaKnown RBP6.67□□□□□ -1.34
HMGB4-203ENST00000519684 MFAP4P55083 255 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 RANP62826 216 aaKnown RBP6.67□□□□□ -1.34
HMGB4-203ENST00000519684 RPL19P84098 196 aaKnown RBP6.67□□□□□ -1.34
HMGB4-203ENST00000519684 FBLN7Q53RD9 439 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 CLEC2AQ6UVW9 174 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 TTC9CQ8N5M4 171 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 CDC42EP3Q9UKI2 254 aa6.67□□□□□ -1.34
HMGB4-203ENST00000519684 NDUFS8O00217 210 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 TOMM40O96008 361 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 OR5I1Q13606 314 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 IGF2BP2-AS1Q96M15 143 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 OSTCQ9NRP0 149 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 PITPNC1Q9UKF7 332 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 TPRP12270 2363 aaKnown RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 IGLV11-55A0A075B6I3 123 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 PGPA6NDG6 321 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 SLC17A3O00476 420 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 PHOX2AO14813 284 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 GCGP01275 180 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 GP9P14770 177 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 HIST1H1BP16401 226 aaKnown RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 UBE2G1P62253 170 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 Q56UQ5 140 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 KLF17Q5JT82 389 aaPredicted RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 FAM120AOSQ5T036 256 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 SLC25A39Q9BZJ4 359 aaPredicted RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 GAR1Q9NY12 217 aaKnown RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 POLR3KQ9Y2Y1 108 aaPredicted RBP6.66□□□□□ -1.34
HMGB4-203ENST00000519684 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
HMGB4-203ENST00000519684 NBASA2RRP1 2371 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 ISLRO14498 428 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 IGKV1-17P01599 117 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 HLA-DRB1P01911 266 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 SNRPCP09234 159 aaKnown RBP6.65□□□□□ -1.34
HMGB4-203ENST00000519684 ATP5J2P56134 94 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 NDPQ00604 133 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 ASPHD1Q5U4P2 390 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 LEMD1Q68G75 181 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 Q8N9W7 124 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 TMEM68Q96MH6 324 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 ZNF48Q96MX3 618 aaPredicted RBP6.65□□□□□ -1.34
HMGB4-203ENST00000519684 TMEM14CQ9P0S9 112 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 EPDR1Q9UM22 224 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 RPH3ALQ9UNE2 315 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 DCHS2Q6V1P9 2916 aa6.65□□□□□ -1.34
HMGB4-203ENST00000519684 IGHV7-81A0A0B4J1V7 117 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 PCP4L1A6NKN8 68 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 YPEL3P61236 119 aaPredicted RBP6.65□□□□□ -1.35
HMGB4-203ENST00000519684 GNG5P63218 68 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 RELQ04864 619 aaPredicted RBP6.65□□□□□ -1.35
HMGB4-203ENST00000519684 IBA57Q5T440 356 aaKnown RBP6.65□□□□□ -1.35
HMGB4-203ENST00000519684 BAGE2Q86Y30 109 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 HIST3H2BBQ8N257 126 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 C10orf105Q8TEF2 133 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 RNF125Q96EQ8 232 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 RNASE7Q9H1E1 156 aaKnown RBP6.65□□□□□ -1.35
HMGB4-203ENST00000519684 SERTAD4Q9NUC0 356 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 C21orf62Q9NYP8 219 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 MRPL27Q9P0M9 148 aaKnown RBP6.65□□□□□ -1.35
HMGB4-203ENST00000519684 RNF24Q9Y225 148 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 V9GYV3 84 aa6.65□□□□□ -1.35
HMGB4-203ENST00000519684 CENPVL3A0A0U1RRI6 287 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 XKRY2A2RUG3 117 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 IL4P05112 153 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 HIST1H1EP10412 219 aaKnown RBP6.64□□□□□ -1.35
HMGB4-203ENST00000519684 MYCNOSP40205 109 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 TMEM183BQ1AE95 376 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 PDZD11Q5EBL8 140 aa6.64□□□□□ -1.35
HMGB4-203ENST00000519684 BPIFA4PQ86YQ2 179 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms