RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 C17orf82Q86X59 251 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-208ENST00000519004 PRSS3P2Q8NHM4 247 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 ANAPC13Q9BS18 74 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 ZNF492Q9P255 531 aa10.95□□□□□ -0.66
PABPC1-208ENST00000519004 MOSP00540 346 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 CCL3P10147 92 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 MYCNOSP40205 109 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 Q8IYB0 196 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 OR9G1Q8NH87 305 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 SRSF6Q13247 344 aaKnown RBP10.94□□□□□ -0.66
PABPC1-208ENST00000519004 C3AR1Q16581 482 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 CEND1Q8N111 149 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 COQ2Q96H96 371 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 DEFB126Q9BYW3 111 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 TTTY13Q9BZ97 58 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 KLF12Q9Y4X4 402 aa10.94□□□□□ -0.66
PABPC1-208ENST00000519004 F5P12259 2224 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 CXCL13O43927 109 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 CT45A10P0DMU9 189 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 MYOD1P15172 320 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
PABPC1-208ENST00000519004 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-208ENST00000519004 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 GGNQ86UU5 652 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 ZNF414Q96IQ9 312 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 PAXXQ9BUH6 204 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 CEP192Q8TEP8 1941 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 COL6A3P12111 3177 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
PABPC1-208ENST00000519004 DEFB133Q30KQ1 61 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 RFESDQ8TAC1 157 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 UFC1Q9Y3C8 167 aa10.93□□□□□ -0.66
PABPC1-208ENST00000519004 PRRG2O14669 202 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 B3GALT5-AS1P59052 145 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 TMEM178AQ8NBL3 297 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 PIFOQ8TCI5 191 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 ENY2Q9NPA8 101 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 TMEM14BQ9NUH8 114 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 FOXA2Q9Y261 457 aaPredicted RBP10.92□□□□□ -0.66
PABPC1-208ENST00000519004 MYO15AQ9UKN7 3530 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 PLGLB1Q02325 96 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 MLANAQ16655 118 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 SMRP1Q8NCR6 262 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 DKK2Q9UBU2 259 aa10.92□□□□□ -0.66
PABPC1-208ENST00000519004 IGHV3-64DA0A0J9YX35 117 aa10.91□□□□□ -0.66
PABPC1-208ENST00000519004 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
PABPC1-208ENST00000519004 NFE4Q86UQ8 179 aa10.91□□□□□ -0.66
PABPC1-208ENST00000519004 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
PABPC1-208ENST00000519004 OR13A1Q8NGR1 328 aa10.91□□□□□ -0.66
PABPC1-208ENST00000519004 OCIAD1Q9NX40 245 aa10.91□□□□□ -0.66
PABPC1-208ENST00000519004 CELA2AP08217 269 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-208ENST00000519004 RPL39P5Q59GN2 51 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 SMIM20Q8N5G0 67 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 PRELID3AQ96N28 172 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
PABPC1-208ENST00000519004 TNFRSF18Q9Y5U5 241 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 TRBV25-1A0A075B6N4 114 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 IGHV1OR21-1A0A087WYE8 117 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 CNIH1O95406 144 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 TFF1P04155 84 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 SLC25A5P05141 298 aaKnown RBP10.9□□□□□ -0.66
PABPC1-208ENST00000519004 NHLRC4P0CG21 123 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-208ENST00000519004 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-208ENST00000519004 FXYD7P58549 80 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 HINT2Q9BX68 163 aa10.9□□□□□ -0.66
PABPC1-208ENST00000519004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-208ENST00000519004 HOXA4Q00056 320 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-208ENST00000519004 SRYQ05066 204 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 Q6AWC8 147 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 YRDCQ86U90 279 aaKnown RBP10.89□□□□□ -0.67
PABPC1-208ENST00000519004 IFI27L1Q96BM0 104 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
PABPC1-208ENST00000519004 ZNF714Q96N38 554 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 DEFB118Q96PH6 123 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 NPIPB5A8MRT5 1133 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 DLL1O00548 723 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 FSTL3O95633 263 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 ARMS2P0C7Q2 107 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 PAX8Q06710 450 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 S1PR3Q99500 378 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 CACNA1DQ01668 2161 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 TANC2Q9HCD6 1990 aa10.89□□□□□ -0.67
PABPC1-208ENST00000519004 LOC389332A0A1B0GUA5 103 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 WI2-2373I1.2A0A1W2PRP0 233 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 ZNF766Q5HY98 468 aa10.88□□□□□ -0.67
PABPC1-208ENST00000519004 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms