RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 DYNLT3P51808 116 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 UBE2E1P51965 193 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 ARF6P62330 175 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 PRCDQ00LT1 54 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 SLC38A11Q08AI6 406 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 CLINT1Q14677 625 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 PEA15Q15121 130 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 TPTE2P1Q5T6R2 138 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 RPL7L1Q6DKI1 246 aaKnown RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 OR4A47Q6IF82 309 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 DUX4L9Q6RFH8 374 aaPredicted RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 SSX9Q7RTT3 188 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 C5orf24Q7Z6I8 188 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 COMMD7Q86VX2 200 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 LRRC75A-AS1Q8N1F1 130 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 PNKDQ8N490 385 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 OR2G3Q8NGZ4 309 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 OR2T10Q8NGZ9 312 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 OR2T6Q8NHC8 308 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM167AQ8TBQ9 72 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 RNASEH2CQ8TDP1 164 aaKnown RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 ST6GALNAC6Q969X2 333 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 MARC2Q969Z3 335 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 RBMXL1Q96E39 390 aaKnown RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 NABP2Q9BQ15 211 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 PSMG3Q9BT73 122 aaPredicted RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 MRPL20Q9BYC9 149 aaKnown RBP3.52□□□□□ -1.85
CLDND1-228ENST00000513873 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 BPESC1Q9GZL8 116 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 ARV1Q9H2C2 271 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 PARP11Q9NR21 331 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 MMP26Q9NRE1 261 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM14BQ9NUH8 114 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 RNF24Q9Y225 148 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 MED12LQ86YW9 2145 aa3.52□□□□□ -1.85
CLDND1-228ENST00000513873 USF3Q68DE3 2245 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV1-3A0A0C4DH29 117 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 IGSF23A1L1A6 192 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 MSGN1A6NI15 193 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 MMP23AO75900 390 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 CNIH1O95406 144 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 METTL15P1P0C7V9 234 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 GPX4P36969 197 aaPredicted RBP3.51□□□□□ -1.85
CLDND1-228ENST00000513873 LCN2P80188 198 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 DLK1P80370 383 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 SCGB2A2Q13296 93 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 HES1Q14469 280 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 CLEC12BQ2HXU8 276 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 LRRC75BQ2VPJ9 315 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 ACOT6Q3I5F7 207 aaPredicted RBP3.51□□□□□ -1.85
CLDND1-228ENST00000513873 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 OR8G2PQ6IF36 304 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM14EPQ6UXP3 125 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 PPP1R27Q86WC6 154 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 EIF4E3Q8N5X7 224 aaKnown RBP3.51□□□□□ -1.85
CLDND1-228ENST00000513873 ZNF525Q8N782 197 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 MAPKAPK5-AS1Q8N8E1 139 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 HSD17B11Q8NBQ5 300 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 CLDND2Q8NHS1 167 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 NANPQ8TBE9 248 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 SUN5Q8TC36 379 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 C10orf105Q8TEF2 133 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 CYYR1Q96J86 154 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 SLC35E1Q96K37 410 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 LINC00479Q96M42 142 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 OPRPNQ99935 248 aaPredicted RBP3.51□□□□□ -1.85
CLDND1-228ENST00000513873 C19orf24Q9BVV8 132 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 HINT2Q9BX68 163 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 ACTR3CQ9C0K3 210 aaPredicted RBP3.51□□□□□ -1.85
CLDND1-228ENST00000513873 NARFLQ9H6Q4 476 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 NPVFQ9HCQ7 196 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 CYTL1Q9NRR1 136 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 THYN1Q9P016 225 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 PITPNC1Q9UKF7 332 aa3.51□□□□□ -1.85
CLDND1-228ENST00000513873 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 VWFP04275 2813 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 A0A0G2JRQ6 117 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 A0A1W2PPV4 95 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SMCO3A2RU48 225 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 H3BP45 60 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 LY6LH3BQJ8 138 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 M0QZK8 103 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 FGF16O43320 207 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 LY6HO94772 140 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 CFDP00746 253 aaPredicted RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 IGKV1-16P04430 117 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 MSMBP08118 114 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 NMBP08949 121 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 OR9G9P0C7N8 305 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SAA1P0DJI8 122 aaPredicted RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 DEFA4P12838 97 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 FGF7P21781 194 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 ATP6V0CP27449 155 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 RPL27AP46776 148 aaKnown RBP3.5□□□□□ -1.85
CLDND1-228ENST00000513873 REG1BP48304 166 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 PAX9P55771 341 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 LMO4P61968 165 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 SELENOTP62341 195 aa3.5□□□□□ -1.85
CLDND1-228ENST00000513873 AKR1C1Q04828 323 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms