RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 GLMPQ8WWB7 406 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 NARS2Q96I59 477 aaKnown RBP12.15□□□□□ -0.46
DDX41-213ENST00000512027 PBDC1Q9BVG4 233 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 TRAV6A0A075B6T7 132 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 IGKV1OR2-108A0A075B7D4 117 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 K7EQG2 157 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 ZNF688P0C7X2 276 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
DDX41-213ENST00000512027 GSG1LQ6UXU4 331 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 STPG3Q8N7X2 389 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 RNF125Q96EQ8 232 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 GRAMD2BQ96HH9 432 aa12.14□□□□□ -0.47
DDX41-213ENST00000512027 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
DDX41-213ENST00000512027 TRAV2A0A0B4J234 112 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 CCSO14618 274 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 SPRY2O43597 315 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 SSSCA1O60232 199 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 SCGB1D2O95969 90 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 TCRBP04435 133 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 EWSR1Q01844 656 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDX41-213ENST00000512027 ID3Q02535 119 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 DCANP1Q8TF63 244 aa12.13□□□□□ -0.47
DDX41-213ENST00000512027 PLECQ15149 4684 aaKnown RBP12.13□□□□□ -0.47
DDX41-213ENST00000512027 KIR2DL5BA0A0G2JN68 375 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 KIR2DL5BA0A0G2JPC4 375 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 A6NHS1 94 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 CCNKO75909 580 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 IFNA21P01568 189 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 NKX2-1P43699 371 aaPredicted RBP12.12□□□□□ -0.47
DDX41-213ENST00000512027 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
DDX41-213ENST00000512027 LYZP61626 148 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 Q6ZWC4 215 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 KIR2DL5AQ8N109 375 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 KIR2DL5BQ8NHK3 375 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 RNF183Q96D59 192 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 NUDT15Q9NV35 164 aa12.12□□□□□ -0.47
DDX41-213ENST00000512027 STRAPQ9Y3F4 350 aaKnown RBP12.12□□□□□ -0.47
DDX41-213ENST00000512027 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 UBE2CO00762 179 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 BUB3O43684 328 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 GATA2P23769 480 aaPredicted RBP12.11□□□□□ -0.47
DDX41-213ENST00000512027 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
DDX41-213ENST00000512027 THAP8Q8NA92 274 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 ZBTB8BQ8NAP8 495 aaPredicted RBP12.11□□□□□ -0.47
DDX41-213ENST00000512027 MITD1Q8WV92 249 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 CCDC32Q9BV29 185 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 TBC1D24Q9ULP9 559 aa12.11□□□□□ -0.47
DDX41-213ENST00000512027 HELTA6NFD8 242 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 EIF2B2P49770 351 aaKnown RBP12.1□□□□□ -0.47
DDX41-213ENST00000512027 PAX9P55771 341 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 RPP30P78346 268 aaKnown RBP12.1□□□□□ -0.47
DDX41-213ENST00000512027 OR8G2PQ6IF36 304 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 SIGLEC15Q6ZMC9 328 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
DDX41-213ENST00000512027 TRGV9Q99603 122 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 GSKIPQ9P0R6 139 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 TP53TG1Q9Y2A0 90 aa12.1□□□□□ -0.47
DDX41-213ENST00000512027 CA1P00915 261 aaPredicted RBP12.09□□□□□ -0.47
DDX41-213ENST00000512027 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
DDX41-213ENST00000512027 PSMG4Q5JS54 123 aa12.09□□□□□ -0.47
DDX41-213ENST00000512027 RCL1Q9Y2P8 373 aaKnown RBP12.09□□□□□ -0.47
DDX41-213ENST00000512027 SMCO3A2RU48 225 aa12.08□□□□□ -0.48
DDX41-213ENST00000512027 PMS2P5A8MQ11 134 aa12.08□□□□□ -0.48
DDX41-213ENST00000512027 RRAS2P62070 204 aaPredicted RBP12.08□□□□□ -0.48
DDX41-213ENST00000512027 STHQ8IWL8 128 aa12.08□□□□□ -0.48
DDX41-213ENST00000512027 NRN1Q9NPD7 142 aa12.08□□□□□ -0.48
DDX41-213ENST00000512027 SNRPGP15A8MWD9 76 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
DDX41-213ENST00000512027 H2AFB2P0C5Z0 115 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 METTL15P1P0C7V9 234 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 DEFB1P60022 68 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 PMS2P11Q13670 270 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 TRPT1Q86TN4 253 aaKnown RBP12.07□□□□□ -0.48
DDX41-213ENST00000512027 IL17DQ8TAD2 202 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 ZNF431Q8TF32 576 aaPredicted RBP12.07□□□□□ -0.48
DDX41-213ENST00000512027 PPP1R14BQ96C90 147 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 SMIM8Q96KF7 97 aa12.07□□□□□ -0.48
DDX41-213ENST00000512027 ALMS1Q8TCU4 4167 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 FAM240BA0A1B0GVZ2 78 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 FABP1P07148 127 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 C4BPBP20851 252 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 AP2S1P53680 142 aaPredicted RBP12.06□□□□□ -0.48
DDX41-213ENST00000512027 TMEM14EPQ6UXP3 125 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 S100ZQ8WXG8 99 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 WDR12Q9GZL7 423 aaKnown RBP12.06□□□□□ -0.48
DDX41-213ENST00000512027 PTTG2Q9NZH5 202 aa12.06□□□□□ -0.48
DDX41-213ENST00000512027 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
DDX41-213ENST00000512027 IFITM3Q01628 133 aa12.05□□□□□ -0.48
DDX41-213ENST00000512027 ASAH1Q13510 395 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms