RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 RYR2Q92736 4967 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 IGKV1OR2-108A0A075B7D4 117 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 KIR2DL5BA0A0G2JN68 375 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 KIR2DL5BA0A0G2JPC4 375 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 PRSS46E5RG02 174 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 LYRM1O43325 122 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 GPX4P36969 197 aaPredicted RBP9.77□□□□□ -0.85
RNF4-215ENST00000511843 RAB11AP62491 216 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 Q6ZWC4 215 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 KIR2DL5AQ8N109 375 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 KIR2DL5BQ8NHK3 375 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 COQ8AQ8NI60 647 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 DCANP1Q8TF63 244 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 RNF183Q96D59 192 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 RNF125Q96EQ8 232 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 C7orf50Q9BRJ6 194 aaKnown RBP9.77□□□□□ -0.85
RNF4-215ENST00000511843 C20orf85Q9H1P6 137 aa9.77□□□□□ -0.85
RNF4-215ENST00000511843 TRAV6A0A075B6T7 132 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 UBE2CO00762 179 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 CCSO14618 274 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 SSSCA1O60232 199 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 CMC4P56277 68 aaPredicted RBP9.76□□□□□ -0.85
RNF4-215ENST00000511843 ATP5IP56385 69 aaPredicted RBP9.76□□□□□ -0.85
RNF4-215ENST00000511843 LYZP61626 148 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 OR4D5Q8NGN0 318 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 CIB3Q96Q77 187 aaPredicted RBP9.76□□□□□ -0.85
RNF4-215ENST00000511843 CSTL1Q9H114 145 aa9.76□□□□□ -0.85
RNF4-215ENST00000511843 DYNC2H1Q8NCM8 4307 aaKnown RBP9.75□□□□□ -0.85
RNF4-215ENST00000511843 BUB3O43684 328 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 CCNKO75909 580 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 IFNA21P01568 189 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 TCRBP04435 133 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 ID3Q02535 119 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 CNPY1Q3B7I2 92 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 SEC22CQ9BRL7 303 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 NUDT15Q9NV35 164 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
RNF4-215ENST00000511843 HELTA6NFD8 242 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 CA1P00915 261 aaPredicted RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 GATA2P23769 480 aaPredicted RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 NKX2-1P43699 371 aaPredicted RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 EIF2B2P49770 351 aaKnown RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 PMS2P11Q13670 270 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 IAH1Q2TAA2 248 aaPredicted RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 PSMG4Q5JS54 123 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 STHQ8IWL8 128 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 PSENENQ9NZ42 101 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 GSKIPQ9P0R6 139 aa9.74□□□□□ -0.85
RNF4-215ENST00000511843 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
RNF4-215ENST00000511843 SACSQ9NZJ4 4579 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 LCE6AA0A183 80 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 PAX9P55771 341 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 DEFB1P60022 68 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 RPP30P78346 268 aaKnown RBP9.73□□□□□ -0.85
RNF4-215ENST00000511843 AKR1C1Q04828 323 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 TMEM182Q6ZP80 229 aaPredicted RBP9.73□□□□□ -0.85
RNF4-215ENST00000511843 TRPT1Q86TN4 253 aaKnown RBP9.73□□□□□ -0.85
RNF4-215ENST00000511843 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 ZBTB8BQ8NAP8 495 aaPredicted RBP9.73□□□□□ -0.85
RNF4-215ENST00000511843 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 MITD1Q8WV92 249 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 TRGV9Q99603 122 aa9.73□□□□□ -0.85
RNF4-215ENST00000511843 SMCO3A2RU48 225 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 DEFB4AO15263 64 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 METTL15P1P0C7V9 234 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 C4BPBP20851 252 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 PPP1R14BQ96C90 147 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 CCDC32Q9BV29 185 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 NRN1Q9NPD7 142 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 TBC1D24Q9ULP9 559 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 RCL1Q9Y2P8 373 aaKnown RBP9.72□□□□□ -0.85
RNF4-215ENST00000511843 HYDINQ4G0P3 5121 aa9.72□□□□□ -0.85
RNF4-215ENST00000511843 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 A6NHS1 94 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 PMS2P5A8MQ11 134 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 SNRPGP15A8MWD9 76 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 FABP1P07148 127 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 GIG44P09565 113 aaPredicted RBP9.71□□□□□ -0.86
RNF4-215ENST00000511843 AP2S1P53680 142 aaPredicted RBP9.71□□□□□ -0.86
RNF4-215ENST00000511843 RRAS2P62070 204 aaPredicted RBP9.71□□□□□ -0.86
RNF4-215ENST00000511843 OR11H2Q8NH07 326 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 SMIM8Q96KF7 97 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 RAB40CQ96S21 281 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 RARRES2Q99969 163 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.86
RNF4-215ENST00000511843 CLEC5AQ9NY25 188 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 LYSTQ99698 3801 aa9.71□□□□□ -0.86
RNF4-215ENST00000511843 MBPP02686 304 aaPredicted RBP9.7□□□□□ -0.86
RNF4-215ENST00000511843 H2AFB2P0C5Z0 115 aa9.7□□□□□ -0.86
RNF4-215ENST00000511843 ORM2P19652 201 aa9.7□□□□□ -0.86
RNF4-215ENST00000511843 ZNF431Q8TF32 576 aaPredicted RBP9.7□□□□□ -0.86
RNF4-215ENST00000511843 DOK5Q9P104 306 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms