RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 C16orf54Q6UWD8 224 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 LYG2Q86SG7 212 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 OR51G1Q8NGK1 321 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 DCANP1Q8TF63 244 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 RNF183Q96D59 192 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
LSM6-206ENST00000510331 C7orf50Q9BRJ6 194 aaKnown RBP13.65□□□□□ -0.22
LSM6-206ENST00000510331 PLECQ15149 4684 aaKnown RBP13.64□□□□□ -0.23
LSM6-206ENST00000510331 LCE6AA0A183 80 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 CENPXA8MT69 81 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 WRBO00258 174 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 MED6O75586 246 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
LSM6-206ENST00000510331 ATP5IP56385 69 aaPredicted RBP13.64□□□□□ -0.23
LSM6-206ENST00000510331 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 PBDC1Q9BVG4 233 aa13.64□□□□□ -0.23
LSM6-206ENST00000510331 PRSS46E5RG02 174 aa13.63□□□□□ -0.23
LSM6-206ENST00000510331 RAB11AP62491 216 aa13.63□□□□□ -0.23
LSM6-206ENST00000510331 COQ8AQ8NI60 647 aa13.63□□□□□ -0.23
LSM6-206ENST00000510331 CIB3Q96Q77 187 aaPredicted RBP13.63□□□□□ -0.23
LSM6-206ENST00000510331 CSTL1Q9H114 145 aa13.63□□□□□ -0.23
LSM6-206ENST00000510331 C20orf85Q9H1P6 137 aa13.63□□□□□ -0.23
LSM6-206ENST00000510331 ALMS1Q8TCU4 4167 aa13.62□□□□□ -0.23
LSM6-206ENST00000510331 IGKV1OR2-108A0A075B7D4 117 aa13.62□□□□□ -0.23
LSM6-206ENST00000510331 HELTA6NFD8 242 aa13.62□□□□□ -0.23
LSM6-206ENST00000510331 PLA2G10O15496 165 aa13.62□□□□□ -0.23
LSM6-206ENST00000510331 CA1P00915 261 aaPredicted RBP13.62□□□□□ -0.23
LSM6-206ENST00000510331 IL17DQ8TAD2 202 aa13.62□□□□□ -0.23
LSM6-206ENST00000510331 HYDINQ4G0P3 5121 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 LYRM1O43325 122 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 BUB3O43684 328 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 EIF2B2P49770 351 aaKnown RBP13.61□□□□□ -0.23
LSM6-206ENST00000510331 LYZP61626 148 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 POLR2GP62487 172 aaKnown RBP eCLIP13.61□□□□□ -0.23
LSM6-206ENST00000510331 OR2F1Q13607 317 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 SPANXN5Q5MJ07 72 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 OR4D5Q8NGN0 318 aa13.61□□□□□ -0.23
LSM6-206ENST00000510331 SSSCA1O60232 199 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 PMS2P11Q13670 270 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 SIGLEC15Q6ZMC9 328 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 ACOT7LQ6ZUV0 252 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 THAP8Q8NA92 274 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 TRGV9Q99603 122 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 DNAH1Q9P2D7 4330 aa13.6□□□□□ -0.23
LSM6-206ENST00000510331 IFNA21P01568 189 aa13.59□□□□□ -0.23
LSM6-206ENST00000510331 NKX2-1P43699 371 aaPredicted RBP13.59□□□□□ -0.23
LSM6-206ENST00000510331 RPP30P78346 268 aaKnown RBP13.59□□□□□ -0.23
LSM6-206ENST00000510331 ID3Q02535 119 aa13.59□□□□□ -0.23
LSM6-206ENST00000510331 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
LSM6-206ENST00000510331 TRPT1Q86TN4 253 aaKnown RBP13.59□□□□□ -0.23
LSM6-206ENST00000510331 STHQ8IWL8 128 aa13.59□□□□□ -0.23
LSM6-206ENST00000510331 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
LSM6-206ENST00000510331 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
LSM6-206ENST00000510331 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 FABP1P07148 127 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 C4BPBP20851 252 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 AKR1C1Q04828 323 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 MITD1Q8WV92 249 aa13.58□□□□□ -0.24
LSM6-206ENST00000510331 TRAV6A0A075B6T7 132 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 CXorf65A6NEN9 183 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 CCSO14618 274 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 CCNKO75909 580 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 NUP62P37198 522 aaPredicted RBP13.57□□□□□ -0.24
LSM6-206ENST00000510331 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
LSM6-206ENST00000510331 IAH1Q2TAA2 248 aaPredicted RBP13.57□□□□□ -0.24
LSM6-206ENST00000510331 CCDC32Q9BV29 185 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 NUDT15Q9NV35 164 aa13.57□□□□□ -0.24
LSM6-206ENST00000510331 TCRBP04435 133 aa13.56□□□□□ -0.24
LSM6-206ENST00000510331 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
LSM6-206ENST00000510331 GSG1LQ6UXU4 331 aa13.56□□□□□ -0.24
LSM6-206ENST00000510331 ZBTB8BQ8NAP8 495 aaPredicted RBP13.56□□□□□ -0.24
LSM6-206ENST00000510331 OR11H2Q8NH07 326 aa13.56□□□□□ -0.24
LSM6-206ENST00000510331 RARRES2Q99969 163 aa13.56□□□□□ -0.24
LSM6-206ENST00000510331 PSENENQ9NZ42 101 aa13.56□□□□□ -0.24
LSM6-206ENST00000510331 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
LSM6-206ENST00000510331 SMCO3A2RU48 225 aa13.55□□□□□ -0.24
LSM6-206ENST00000510331 SNRPGP15A8MWD9 76 aa13.55□□□□□ -0.24
LSM6-206ENST00000510331 GATA2P23769 480 aaPredicted RBP13.55□□□□□ -0.24
LSM6-206ENST00000510331 CNPY1Q3B7I2 92 aa13.55□□□□□ -0.24
LSM6-206ENST00000510331 PPP1R14BQ96C90 147 aa13.55□□□□□ -0.24
LSM6-206ENST00000510331 SEC22CQ9BRL7 303 aa13.55□□□□□ -0.24
LSM6-206ENST00000510331 WDR12Q9GZL7 423 aaKnown RBP13.55□□□□□ -0.24
LSM6-206ENST00000510331 PAX9P55771 341 aa13.54□□□□□ -0.24
LSM6-206ENST00000510331 SNRPD3P62318 126 aaKnown RBP13.54□□□□□ -0.24
LSM6-206ENST00000510331 TMEM182Q6ZP80 229 aaPredicted RBP13.54□□□□□ -0.24
LSM6-206ENST00000510331 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
LSM6-206ENST00000510331 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
LSM6-206ENST00000510331 TBC1D24Q9ULP9 559 aa13.54□□□□□ -0.24
LSM6-206ENST00000510331 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 DEFB4AO15263 64 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 JTBO76095 146 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 SPP1P10451 314 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 DEFB1P60022 68 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
LSM6-206ENST00000510331 SMIM8Q96KF7 97 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms