RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 SFT2D1Q8WV19 159 aa1.2□□□□□ -2.22
COL4A3BP-205ENST00000508692 C4orf3Q8WVX3 66 aa1.2□□□□□ -2.22
COL4A3BP-205ENST00000508692 C6orf62Q9GZU0 229 aaPredicted RBP1.2□□□□□ -2.22
COL4A3BP-205ENST00000508692 KLK9Q9UKQ9 250 aa1.2□□□□□ -2.22
COL4A3BP-205ENST00000508692 SDK1Q7Z5N4 2213 aa1.2□□□□□ -2.22
COL4A3BP-205ENST00000508692 IGKV2D-26A0A0A0MRZ7 120 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 GEMIN2O14893 280 aaKnown RBP1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 LYZL6O75951 148 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 ATG12O94817 140 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 NDUFC2O95298 119 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 RNASE4P34096 147 aaKnown RBP1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 C22orf39Q6P5X5 142 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 LINC00301Q8NCQ3 95 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 SLC30A7Q8NEW0 376 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 SLAMF6Q96DU3 332 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 MRPL57Q9BQC6 102 aaKnown RBP1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 PRADC1Q9BSG0 188 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 BCL2L10Q9HD36 194 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 RASL12Q9NYN1 266 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 MYH11P35749 1972 aa1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 EIF3AQ14152 1382 aaKnown RBP1.19□□□□□ -2.22
COL4A3BP-205ENST00000508692 MIA2Q96PC5 1412 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 ECM29Q5VYK3 1845 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 C1QBP02746 253 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 MYL5Q02045 173 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 SCGB2B2Q4G0G5 96 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 HACD4Q5VWC8 232 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 TMED4Q7Z7H5 227 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 S100A7AQ86SG5 101 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 CANT1Q8WVQ1 401 aa1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
COL4A3BP-205ENST00000508692 HEATR5AQ86XA9 2040 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 A8MWV9 139 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 G3V2T6 193 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 NCALDP61601 193 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 UBE2BP63146 152 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 DYNLT1P63172 113 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 RPL19P84098 196 aaKnown RBP1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 POU6F1Q14863 301 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 TMEM70Q9BUB7 260 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 RIMBP3CA6NJZ7 1639 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 RIMBP3BA6NNM3 1639 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 RIMBP3Q9UFD9 1639 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 KIF1BO60333 1816 aa1.17□□□□□ -2.22
COL4A3BP-205ENST00000508692 COL4A5P29400 1685 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 FREM1Q5H8C1 2179 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 LOC110117498A0A087WWA1 95 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 TRAV3A0A0B4J244 114 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 TAX1BP3O14907 124 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 NDUFB3O43676 98 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 TIMM17BO60830 172 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 C1orf137Q5JT78 98 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 C3orf56Q8N813 242 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 ZNF418Q8TF45 676 aaPredicted RBP1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 TEX37Q96LM6 180 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 TMEM126AQ9H061 195 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 IL20Q9NYY1 176 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
COL4A3BP-205ENST00000508692 BAZ2BQ9UIF8 2168 aaKnown RBP1.15□□□□□ -2.22
COL4A3BP-205ENST00000508692 GADD45GO95257 159 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 IFNA1P01562 189 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 AKR1C8PQ5T2L2 129 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 PDZD9Q8IXQ8 264 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 OR13C6PQ8NH95 151 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 CDC26Q8NHZ8 85 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 STAG3L4Q8TBR4 150 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 AP3S1Q92572 193 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 LINC00526Q96FQ7 95 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 GPER1Q99527 375 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 SLC25A21Q9BQT8 299 aaPredicted RBP1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 CCDC94Q9BW85 323 aaPredicted RBP1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 LYRM2Q9NU23 88 aaPredicted RBP1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 ACER3Q9NUN7 267 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 SBF1O95248 1867 aa1.15□□□□□ -2.23
COL4A3BP-205ENST00000508692 CCDC88AQ3V6T2 1871 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 TRBV6-8A0A0A6YYG3 113 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 DUXBA0A1W2PPF3 345 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 H7C1C5 153 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 CST8O60676 142 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 BANF1O75531 89 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 DHFRP00374 187 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 APOA2P02652 100 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 PHBP35232 272 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 ZNF93P35789 620 aaPredicted RBP1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 LCN6P62502 163 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 DEFB115Q30KQ5 88 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 DEFB113Q30KQ7 82 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 SOSTDC1Q6X4U4 206 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 ODF3Q96PU9 254 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 SH3BGRL3Q9H299 93 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 PRNDQ9UKY0 176 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 SSR3Q9UNL2 185 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 KDM6AO15550 1401 aaPredicted RBP1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 TNS3Q68CZ2 1445 aa1.14□□□□□ -2.23
COL4A3BP-205ENST00000508692 PRRC2BQ5JSZ5 2229 aaKnown RBP1.13□□□□□ -2.23
COL4A3BP-205ENST00000508692 ANAPC1Q9H1A4 1944 aa1.13□□□□□ -2.23
COL4A3BP-205ENST00000508692 TRBV6-7A0A0A0MS04 114 aa1.13□□□□□ -2.23
COL4A3BP-205ENST00000508692 TMEM256-PLSCR3K7ERE1 68 aa1.13□□□□□ -2.23
COL4A3BP-205ENST00000508692 M0R2N4 97 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms