RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 FAM215AQ9Y5M1 114 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 LOC105371242A0A075B767 164 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 LEMD1Q68G75 181 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MUC15Q8N387 334 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 THAP8Q8NA92 274 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MCRIP2Q9BUT9 160 aaKnown RBP9.55□□□□□ -0.88
UBE3D-206ENST00000505226 KLF12Q9Y4X4 402 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 NKX6-3A6NJ46 265 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 INS-IGF2F8WCM5 200 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
UBE3D-206ENST00000505226 HIST1H1EP10412 219 aaKnown RBP9.54□□□□□ -0.88
UBE3D-206ENST00000505226 TMEM200BQ69YZ2 307 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 TMEM167AQ8TBQ9 72 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 ZNF596Q8TC21 504 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 PRSS22Q9GZN4 317 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 ASCL3Q9NQ33 180 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 A0A1W2PPI3 338 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 hADV38S2A0JD32 116 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 APELAP0DMC3 54 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 RBX1P62877 108 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 FAM27E3Q08E93 113 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 TEX36Q5VZQ5 186 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 OR1L4Q8NGR5 311 aa9.54□□□□□ -0.88
UBE3D-206ENST00000505226 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 IGHV1-24A0A0C4DH33 117 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 hDV102S1A0JD36 115 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 APOA2P02652 100 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 ZNF138P52744 262 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 HCP5Q6MZN7 132 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 OR1B1Q8NGR6 318 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 PGLYRP4Q96LB8 373 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 CEP250Q9BV73 2442 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 PRB4P10163 310 aaPredicted RBP9.53□□□□□ -0.88
UBE3D-206ENST00000505226 CA7P43166 264 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 PDPNQ86YL7 162 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 RBMXL3Q8N7X1 1067 aaKnown RBP9.53□□□□□ -0.88
UBE3D-206ENST00000505226 TMEM70Q9BUB7 260 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 GSX1Q9H4S2 264 aaPredicted RBP9.53□□□□□ -0.88
UBE3D-206ENST00000505226 OVOL3O00110 214 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 FAM87AP0C7U9 286 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 ZNF137PP52743 207 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 HBBP68871 147 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 GPR82Q96P67 336 aa9.53□□□□□ -0.88
UBE3D-206ENST00000505226 IGHV1-69-2A0A0G2JMI3 117 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 C19orf71A6NCJ1 209 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 CRXO43186 299 aaPredicted RBP9.52□□□□□ -0.89
UBE3D-206ENST00000505226 SLC25A17O43808 307 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 BPIFB3P59826 476 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 ATP5L2Q7Z4Y8 100 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 OR4C13Q8NGP0 309 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
UBE3D-206ENST00000505226 TRAV8-1A0A0A6YYK1 113 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 NBEAP1P0C6P0 100 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 MPV17L2Q567V2 206 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 ZNF738Q8NE65 137 aa9.52□□□□□ -0.89
UBE3D-206ENST00000505226 FOXE3Q13461 319 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 MAP1BP46821 2468 aaKnown RBP9.51□□□□□ -0.89
UBE3D-206ENST00000505226 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 ZNF785A8K8V0 405 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 SYS1-DBNDD2H3BUS1 97 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 LTAP01374 205 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 GP9P14770 177 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 DLX1P56177 255 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 LYPD2Q6UXB3 125 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 DEFB109BQ30KR1 87 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 ARL6IP6Q8N6S5 226 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 ASCL2Q99929 193 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 PKDREJQ9NTG1 2253 aa9.51□□□□□ -0.89
UBE3D-206ENST00000505226 CRYGCP07315 174 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 CD40P25942 277 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 CEACAM8P31997 349 aaPredicted RBP9.5□□□□□ -0.89
UBE3D-206ENST00000505226 OR10X1Q8NGY0 326 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 GAL3ST2Q9H3Q3 398 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 EP300Q09472 2414 aaPredicted RBP9.5□□□□□ -0.89
UBE3D-206ENST00000505226 CNTFRP26992 372 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
UBE3D-206ENST00000505226 TMEM30BQ3MIR4 351 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 CIARTQ8N365 385 aaPredicted RBP9.5□□□□□ -0.89
UBE3D-206ENST00000505226 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 IGHV2-70DA0A0C4DH43 119 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 TCRAP04437 139 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 FBLN7Q53RD9 439 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 PERPQ96FX8 193 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 LOXL4Q96JB6 756 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 Q9H3A6 140 aa9.5□□□□□ -0.89
UBE3D-206ENST00000505226 AKAP13Q12802 2813 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 P01737 135 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
UBE3D-206ENST00000505226 OR4A5Q8NH83 315 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
UBE3D-206ENST00000505226 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 A8MWL6 223 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 K7EP13 123 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 TOX4O94842 621 aa9.49□□□□□ -0.89
UBE3D-206ENST00000505226 IGLV2-11P01706 119 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms